RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SOHLH1Q5JUK2 328 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 TMEM229BQ8NBD8 167 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 COQ8AQ8NI60 647 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 LHFPL5Q8TAF8 219 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 FAM210BQ96KR6 192 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 PBDC1Q9BVG4 233 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 MRPS26Q9BYN8 205 aaKnown RBP4.51□□□□□ -1.69
CSDE1-213ENST00000530784 NAA60Q9H7X0 242 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 CACFD1Q9UGQ2 172 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 RFNGQ9Y644 331 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 IGLV2-18A0A075B6J9 118 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 HTN3P15516 51 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 PSMB3P49720 205 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 FXYD7P58549 80 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 PRR4Q16378 134 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 NMSQ5H8A3 153 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 GDF5OSQ5U4N7 250 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 FAM222AQ5U5X8 452 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 GPR107Q5VW38 600 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 OR8G2PQ6IF36 304 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 FOXI2Q6ZQN5 318 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 SELENOHQ8IZQ5 122 aaKnown RBP4.5□□□□□ -1.69
CSDE1-213ENST00000530784 OR4B1Q8NGF8 309 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 OR51G1Q8NGK1 321 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 GLYATL2Q8WU03 294 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 GPR146Q96CH1 333 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 LINC00052Q96N35 136 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 NIPSNAP3BQ9BS92 247 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 SAV1Q9H4B6 383 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-213ENST00000530784 GOLT1BQ9Y3E0 138 aa4.5□□□□□ -1.69
CSDE1-213ENST00000530784 CRYM-AS1A6NIL9 109 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 DISC1C4P0D8 188 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 GABARAPH6UMI1 98 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 GABARAPO95166 117 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 HBE1P02100 147 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 FABP1P07148 127 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SULT1A3P0DMM9 295 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SULT1A4P0DMN0 295 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 DEFB1P60022 68 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SUPT4H1P63272 117 aaKnown RBP4.49□□□□□ -1.69
CSDE1-213ENST00000530784 MRPS10P82664 201 aaKnown RBP4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SSBP1Q04837 148 aaKnown RBP4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SAMD13Q5VXD3 122 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SPATA31B1PQ5VZV4 182 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 EBLN2Q6P2I7 272 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 LGI3Q8N145 548 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF709Q8N972 641 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 DTD1Q8TEA8 209 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 PPP1R14BQ96C90 147 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 C7orf50Q9BRJ6 194 aaKnown RBP4.49□□□□□ -1.69
CSDE1-213ENST00000530784 RTBDNQ9BSG5 229 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-213ENST00000530784 SLC35B3Q9H1N7 401 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 YTHDF2Q9Y5A9 579 aaKnown RBP4.49□□□□□ -1.69
CSDE1-213ENST00000530784 TMEM56-RWDD3S4R434 201 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 U3KQ87 197 aa4.49□□□□□ -1.69
CSDE1-213ENST00000530784 E9PLD3 99 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 ISLRO14498 428 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 RGS5O15539 181 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 AKAIN1P0CW23 69 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 CCR6P51684 374 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-213ENST00000530784 DAD1P61803 113 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 PSG9Q00887 426 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF90Q03938 601 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 OXA1LQ15070 435 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 RRN3P1Q2M238 152 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 C1orf194Q5T5A4 169 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 C1orf134Q5TEV5 83 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 C1orf158Q8N1D5 194 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 SLC35E1Q96K37 410 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 PRRT1Q99946 306 aa4.48□□□□□ -1.69
CSDE1-213ENST00000530784 IGKV1D-37A0A075B6S9 117 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 A0A0B4J2A0 478 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 A0A0J9YX75 114 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 SNRPGP15A8MWD9 76 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 F6UB75 175 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF701M0R085 212 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-213ENST00000530784 GPX4P36969 197 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-213ENST00000530784 OR2F1Q13607 317 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 FAM78BQ5VT40 261 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 OR8I2Q8N0Y5 310 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-213ENST00000530784 C15orf53Q8NAA6 179 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 OR4C16Q8NGL9 310 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 OR1S1Q8NH92 325 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 SMIM4Q8WVI0 70 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 NAA50Q9GZZ1 169 aaKnown RBP4.47□□□□□ -1.69
CSDE1-213ENST00000530784 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 MIXL1Q9H2W2 232 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 RBKSQ9H477 322 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 RPRMQ9NS64 109 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 DOK5Q9P104 306 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 SHPKQ9UHJ6 478 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 KCNIP3Q9Y2W7 256 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
CSDE1-213ENST00000530784 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
CSDE1-213ENST00000530784 PIGBOS1A0A0B4J2F0 54 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms