RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
CMTM1-214ENST00000530141 GFRA4Q9GZZ7 299 aa6.29□□□□□ -1.4
CMTM1-214ENST00000530141 RPP21Q9H633 154 aaKnown RBP6.29□□□□□ -1.4
CMTM1-214ENST00000530141 ZNF702PQ9H963 129 aa6.29□□□□□ -1.4
CMTM1-214ENST00000530141 ESM1Q9NQ30 184 aa6.29□□□□□ -1.4
CMTM1-214ENST00000530141 ZNF331Q9NQX6 463 aaPredicted RBP6.29□□□□□ -1.4
CMTM1-214ENST00000530141 NAT8BQ9UHF3 227 aa6.29□□□□□ -1.4
CMTM1-214ENST00000530141 TRAPPC1Q9Y5R8 145 aa6.29□□□□□ -1.4
CMTM1-214ENST00000530141 VWFP04275 2813 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 IGHV3-35A0A0C4DH35 117 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 SMIM27A0A1W2PRY6 76 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 CLPSL1A2RUU4 121 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 IZUMO1RA6ND01 250 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 SLC17A3O00476 420 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 IGHV3-11P01762 117 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 TRGC2P03986 189 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 SNRPCP09234 159 aaKnown RBP6.28□□□□□ -1.4
CMTM1-214ENST00000530141 LGALS1P09382 135 aaKnown RBP6.28□□□□□ -1.4
CMTM1-214ENST00000530141 ACTL10Q5JWF8 245 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 Q6AWC8 147 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 PRNTQ86SH4 94 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 RNF152Q8N8N0 203 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 GLMPQ8WWB7 406 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 UBE2E2Q96LR5 201 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 LINC00479Q96M42 142 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 DUX5Q96PT3 197 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
CMTM1-214ENST00000530141 DAZ1Q9NQZ3 744 aaKnown RBP6.28□□□□□ -1.4
CMTM1-214ENST00000530141 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
CMTM1-214ENST00000530141 IGHV7-4-1A0A0J9YVY3 117 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 C5orf52A6NGY3 159 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 UBE2CO00762 179 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 CHEK1O14757 476 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 S100A8P05109 93 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 RPS20P60866 119 aaKnown RBP6.27□□□□□ -1.41
CMTM1-214ENST00000530141 PRR27Q6MZM9 219 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 COX8CQ7Z4L0 72 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 MYOZ3Q8TDC0 251 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 C16orf92Q96LL3 132 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 C17orf77Q96MU5 243 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 JMJD8Q96S16 334 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 KLK15Q9H2R5 256 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 SMAD5-AS1Q9Y6J3 95 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
CMTM1-214ENST00000530141 C19orf71A6NCJ1 209 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 NPIPB6E9PJ23 425 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 M0QZ24 198 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 LGALS9O00182 355 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 OVOL1O14753 267 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 IGLV2-11P01706 119 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 TRGC1P0CF51 173 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 ID1P41134 155 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
CMTM1-214ENST00000530141 SMUG1Q53HV7 270 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 LCN12Q6JVE5 192 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 NHLRC2Q8NBF2 726 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 ZNF418Q8TF45 676 aaPredicted RBP6.26□□□□□ -1.41
CMTM1-214ENST00000530141 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
CMTM1-214ENST00000530141 BORCS7Q96B45 105 aa6.26□□□□□ -1.41
CMTM1-214ENST00000530141 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 A0A1B0GW15 77 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 M0R3E3 92 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 ZNF207O43670 478 aaKnown RBP6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HOXA5P20719 270 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 NDUFA6P56556 154 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HILS1P60008 231 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
CMTM1-214ENST00000530141 FAM162BQ5T6X4 162 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 TMEM78Q5T7P6 136 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 FRZBQ92765 325 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 ZNF747Q9BV97 191 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 RHPN1-AS1Q9BWJ2 59 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 NRN1Q9NPD7 142 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 PPP1R14DQ9NXH3 145 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 SMPXQ9UHP9 88 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 LENEPQ9Y5L5 61 aa6.25□□□□□ -1.41
CMTM1-214ENST00000530141 DNAJC9-AS1A6NH13 148 aa6.24□□□□□ -1.41
CMTM1-214ENST00000530141 A8MWP6 167 aa6.24□□□□□ -1.41
CMTM1-214ENST00000530141 SNURFLB1AK76 121 aa6.24□□□□□ -1.41
CMTM1-214ENST00000530141 TRBV12-3P01733 135 aa6.24□□□□□ -1.41
CMTM1-214ENST00000530141 S100A2P29034 98 aa6.24□□□□□ -1.41
CMTM1-214ENST00000530141 CDX1P47902 265 aaPredicted RBP6.24□□□□□ -1.41
CMTM1-214ENST00000530141 AKR1D1P51857 326 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms