RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CSN1S1P47710 185 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 EMP1P54849 157 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 SUN5Q8TC36 379 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 VGLL1Q99990 258 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 ARPC5LQ9BPX5 153 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 LCE6AA0A183 80 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 C11orf94C9JXX5 98 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 AZU1P20160 251 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 GCHFRP30047 84 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 TAS2R60P59551 318 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 TMEM78Q5T7P6 136 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 SACSQ9NZJ4 4579 aa9.07□□□□□ -0.96
CCDC90B-216ENST00000529856 RBAKDNA6NC62 111 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 KLLNB2CW77 178 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 H7BYZ3 331 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 J3KRW8 73 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 CXorf1O96002 111 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 CRISP2P16562 243 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 FAM74A1Q5RGS3 127 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 AKR1C8PQ5T2L2 129 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 Q6ZTC4 211 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF767PQ75MW2 155 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 TCTE3Q8IZS6 198 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 ARL6IP6Q8N6S5 226 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF492Q9P255 531 aa9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 YTHDF2Q9Y5A9 579 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-216ENST00000529856 TRAV12-3A0A0B4J271 114 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 TEX48A0A1B0GUV7 120 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 KANTRA0A1W2PQU2 76 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 BCL2L11O43521 198 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 NMBP08949 121 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 HTN1P15515 57 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF138P52744 262 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 TMUB2Q71RG4 321 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 CMTM2Q8TAZ6 248 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 TMEM167BQ9NRX6 74 aa9.05□□□□□ -0.96
CCDC90B-216ENST00000529856 RYR3Q15413 4870 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 LYSTQ99698 3801 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 TRBV7-9A0A0J9YWB2 115 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 PLAC8L1A1L4L8 177 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 C7orf71A4D174 169 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF324O75467 553 aaPredicted RBP9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 GPX1P07203 203 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 CD300CQ08708 224 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF493Q6ZR52 646 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 ZFAND2AQ8N6M9 145 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 C2CD4CQ8TF44 421 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 C16orf74Q96GX8 76 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 NIPSNAP3BQ9BS92 247 aa9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF471Q9BX82 626 aaPredicted RBP9.04□□□□□ -0.96
CCDC90B-216ENST00000529856 SEC11BP0C7V7 166 aa9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 RNASE4P34096 147 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 BTN1A1Q13410 526 aa9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 Q8TAT8 98 aa9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 RNASE8Q8TDE3 154 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 TMED6Q8WW62 240 aa9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 PYGO2Q9BRQ0 406 aa9.03□□□□□ -0.96
CCDC90B-216ENST00000529856 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 DEFB131BA0A096LNP1 70 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 LYRM9A8MSI8 78 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 PFDN1O60925 122 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 EIF5AP63241 154 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 LGALSLQ3ZCW2 172 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 PRR9Q5T870 116 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 GOLT1AQ6ZVE7 132 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 CCDC28AQ8IWP9 274 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 TMEM263Q8WUH6 116 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 RPH3ALQ9UNE2 315 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
CCDC90B-216ENST00000529856 A0A1W2PRE2 83 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 IGLL5B9A064 214 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 C1QBP02746 253 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 FGF8P55075 233 aaPredicted RBP9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 TCTAP57738 103 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 DAD1P61803 113 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 GNG5P63218 68 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 IQCF2Q8IXL9 164 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 C5orf17Q8NAS9 161 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
CCDC90B-216ENST00000529856 RYR2Q92736 4967 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 SERTM2A0A1B0GWG4 89 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms