RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 RNASE2P10153 161 aaKnown RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 SLC25A4P12235 298 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 HLA-DMAP28067 261 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 DEFB131AP59861 70 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 SPCS3P61009 180 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 SSBP1Q04837 148 aaKnown RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 OXA1LQ15070 435 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 SURF2Q15527 256 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 PSG3Q16557 428 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 TERB2Q8NHR7 220 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 RNASEH2CQ8TDP1 164 aaKnown RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 NARS2Q96I59 477 aaKnown RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 FAM210BQ96KR6 192 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 METTL26Q96S19 204 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 VCX3AQ9NNX9 186 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 MTFP1Q9UDX5 166 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 PUS1Q9Y606 427 aaKnown RBP eCLIP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 IGHV3OR16-8A0A075B7F1 116 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 IGHV3-21A0A0B4J1V1 117 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 TRAV10A0A0B4J240 114 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 PIGBOS1A0A0B4J2F0 54 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 C3orf85A0A1B0GTC6 90 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 TMEM189A5PLL7 270 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 MEIS3P1A6NDR6 274 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 CENPXA8MT69 81 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 GOSR2O14653 212 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 GSTZ1O43708 216 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-212ENST00000529046 DEDDO75618 318 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 TNFAIP8O95379 198 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 IGKV1-5P01602 117 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 RBMY1A1P0DJD3 496 aaKnown RBP3.05□□□□□ -1.92
CSDE1-212ENST00000529046 RBMY1CP0DJD4 496 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 P0DMU3 169 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 FAM231AP0DMU4 169 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 FAM231CP0DMU5 169 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 LEPP41159 167 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 RORCP51449 518 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 PIGPP57054 158 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 MRPS10P82664 201 aaKnown RBP3.05□□□□□ -1.92
CSDE1-212ENST00000529046 OR5I1Q13606 314 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 RBMY1FQ15415 496 aaKnown RBP3.05□□□□□ -1.92
CSDE1-212ENST00000529046 NEDD8Q15843 81 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 RNASE10Q5GAN6 216 aaKnown RBP3.05□□□□□ -1.92
CSDE1-212ENST00000529046 C1orf194Q5T5A4 169 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 SPATA31B1PQ5VZV4 182 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 SLC35G3Q8N808 338 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 LYPD6BQ8NI32 183 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 IL22RA2Q969J5 263 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 TMEM230Q96A57 120 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 ISOC2Q96AB3 205 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 TP53RKQ96S44 253 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 PDCD10Q9BUL8 212 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 TMEM222Q9H0R3 208 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 RBKSQ9H477 322 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-212ENST00000529046 U3KQ87 197 aa3.05□□□□□ -1.92
CSDE1-212ENST00000529046 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF705FA8MVS1 300 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 IGLL5B9A064 214 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 H3BMM0 161 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 IFNA17P01571 189 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 CD3DP04234 171 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 IGLC1P0CG04 106 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF705DP0CH99 300 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF705BP0CI00 300 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 NPY1RP25929 384 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 HLA-DMBP28068 263 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 TGFBR1P36897 503 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 OPRK1P41145 380 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 TFPI2P48307 235 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 AKR1C2P52895 323 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 TAS2R19P59542 299 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 UBE2MP61081 183 aaKnown RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 SNRPD3P62318 126 aaKnown RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 LGALS9BQ3B8N2 356 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 NMSQ5H8A3 153 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 SAMD13Q5VXD3 122 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF705AQ6ZN79 300 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 FAM24BQ8N5W8 94 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 TMEM229BQ8NBD8 167 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 OR1S2Q8NGQ3 325 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 Q8WTZ3 238 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 AP3S1Q92572 193 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 ACTR3CQ9C0K3 210 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-212ENST00000529046 ENY2Q9NPA8 101 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 COPZ2Q9P299 210 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 COMMD3Q9UBI1 195 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 RABAC1Q9UI14 185 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 TMEM56-RWDD3S4R434 201 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 VPS13DQ5THJ4 4388 aa3.04□□□□□ -1.92
CSDE1-212ENST00000529046 DNAH10Q8IVF4 4471 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 IGKV3-7A0A075B6H7 116 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 IGHV3OR16-13A0A075B7E8 117 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 IGHV3-49A0A0A0MS15 119 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 IGHV3-74A0A0B4J1X5 117 aa3.03□□□□□ -1.92
CSDE1-212ENST00000529046 A0A0B4J2A0 478 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms