RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 MPDU1O75352 247 aa11.72□□□□□ -0.53
LTBP3-211ENST00000528966 RNASE4P34096 147 aaKnown RBP11.72□□□□□ -0.53
LTBP3-211ENST00000528966 MRPS10P82664 201 aaKnown RBP11.72□□□□□ -0.53
LTBP3-211ENST00000528966 SLC38A11Q08AI6 406 aa11.72□□□□□ -0.53
LTBP3-211ENST00000528966 MCFD2Q8NI22 146 aa11.72□□□□□ -0.53
LTBP3-211ENST00000528966 TXNDC17Q9BRA2 123 aa11.72□□□□□ -0.53
LTBP3-211ENST00000528966 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
LTBP3-211ENST00000528966 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
LTBP3-211ENST00000528966 CCNKO75909 580 aa11.71□□□□□ -0.53
LTBP3-211ENST00000528966 ORM1P02763 201 aa11.71□□□□□ -0.53
LTBP3-211ENST00000528966 OPCMLQ14982 345 aa11.71□□□□□ -0.53
LTBP3-211ENST00000528966 BLNKQ8WV28 456 aa11.71□□□□□ -0.53
LTBP3-211ENST00000528966 AP3S1Q92572 193 aa11.71□□□□□ -0.53
LTBP3-211ENST00000528966 SCGB3A2Q96PL1 93 aa11.71□□□□□ -0.53
LTBP3-211ENST00000528966 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-211ENST00000528966 LECT2O14960 151 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 OR4E1P0C645 316 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 RRAS2P62070 204 aaPredicted RBP11.7□□□□□ -0.54
LTBP3-211ENST00000528966 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 S100ZQ8WXG8 99 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 SCP2D1Q9UJQ7 156 aa11.7□□□□□ -0.54
LTBP3-211ENST00000528966 TNXBP22105 4242 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 M0R3E3 92 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 RGS13O14921 159 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 RS1O15537 224 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 HNRNPA3P51991 378 aaKnown RBP11.69□□□□□ -0.54
LTBP3-211ENST00000528966 PRR9Q5T870 116 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 RABL2BQ9UNT1 228 aa11.69□□□□□ -0.54
LTBP3-211ENST00000528966 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 C9JCJ5 164 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 CRISP2P16562 243 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 S100A5P33763 92 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 TIRAPP58753 221 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 OR10P1Q8NGE3 313 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 AGPAT4-IT1Q9H0P7 198 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 NPVFQ9HCQ7 196 aa11.68□□□□□ -0.54
LTBP3-211ENST00000528966 GPX1P07203 203 aa11.67□□□□□ -0.54
LTBP3-211ENST00000528966 ZFAND2AQ8N6M9 145 aa11.67□□□□□ -0.54
LTBP3-211ENST00000528966 ARPC5LQ9BPX5 153 aa11.67□□□□□ -0.54
LTBP3-211ENST00000528966 MCUBQ9NWR8 336 aa11.67□□□□□ -0.54
LTBP3-211ENST00000528966 GOSR2O14653 212 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 COX7A2P2O60397 106 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
LTBP3-211ENST00000528966 ZNF846Q147U1 533 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 GUK1Q16774 197 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 TMEM128Q5BJH2 165 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 ZNF546Q86UE3 836 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
LTBP3-211ENST00000528966 LINC00477Q96M19 166 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 SLC25A31Q9H0C2 315 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 PSENENQ9NZ42 101 aa11.66□□□□□ -0.54
LTBP3-211ENST00000528966 FNDC10F2Z333 226 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 AGPAT2O15120 278 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 CTDSPLO15194 276 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 HOXB5P09067 269 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 VAMP1P23763 118 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 PPT1P50897 306 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 ID3Q02535 119 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
LTBP3-211ENST00000528966 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
LTBP3-211ENST00000528966 CTDSP2O14595 271 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 METTL15P1P0C7V9 234 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 LAGE3Q14657 143 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 C10orf113Q5VZT2 155 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 RASL10AQ92737 203 aa11.64□□□□□ -0.55
LTBP3-211ENST00000528966 RGS5O15539 181 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 ZNF253O75346 499 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 NMBP08949 121 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 TNFSF8P32971 234 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 ASAH1Q13510 395 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 TDRG1Q3Y452 100 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 TMEM14EPQ6UXP3 125 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
LTBP3-211ENST00000528966 TRAV8-6A0A0B4J262 113 aa11.62□□□□□ -0.55
LTBP3-211ENST00000528966 RPL37AP61513 92 aaKnown RBP11.62□□□□□ -0.55
LTBP3-211ENST00000528966 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
LTBP3-211ENST00000528966 SPANXN2Q5MJ10 180 aa11.62□□□□□ -0.55
LTBP3-211ENST00000528966 MGST2Q99735 147 aa11.62□□□□□ -0.55
LTBP3-211ENST00000528966 MGAT4CQ9UBM8 478 aa11.62□□□□□ -0.55
LTBP3-211ENST00000528966 TRBV19A0A075B6N1 114 aa11.61□□□□□ -0.55
LTBP3-211ENST00000528966 IGKV2-40A0A087WW87 121 aaPredicted RBP11.61□□□□□ -0.55
LTBP3-211ENST00000528966 SSSCA1O60232 199 aa11.61□□□□□ -0.55
LTBP3-211ENST00000528966 NDUFB4O95168 129 aa11.61□□□□□ -0.55
LTBP3-211ENST00000528966 IGKV2D-40P01614 121 aaPredicted RBP11.61□□□□□ -0.55
LTBP3-211ENST00000528966 IL18Q14116 193 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms