RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TRAV12-3A0A0B4J271 114 aa23.32■■□□□ 1.32
SSSCA1-205ENST00000527920 CRISP2P16562 243 aa23.32■■□□□ 1.32
SSSCA1-205ENST00000527920 FCN2Q15485 313 aa23.32■■□□□ 1.32
SSSCA1-205ENST00000527920 C15orf53Q8NAA6 179 aa23.32■■□□□ 1.32
SSSCA1-205ENST00000527920 C7orf71A4D174 169 aa23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 J3KRW8 73 aa23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 ATP5G1P05496 136 aa23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 ATP5G3P48201 142 aa23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 FAM122CQ6P4D5 195 aa23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 PHYHIPLQ96FC7 376 aa23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 NOP10Q9NPE3 64 aaKnown RBP23.31■■□□□ 1.32
SSSCA1-205ENST00000527920 UBE2L3P68036 154 aaKnown RBP23.3■■□□□ 1.32
SSSCA1-205ENST00000527920 TMEM78Q5T7P6 136 aa23.3■■□□□ 1.32
SSSCA1-205ENST00000527920 M6PRP20645 277 aa23.29■■□□□ 1.32
SSSCA1-205ENST00000527920 LINC00612Q8N6U2 182 aa23.29■■□□□ 1.32
SSSCA1-205ENST00000527920 AQP10Q96PS8 301 aa23.29■■□□□ 1.32
SSSCA1-205ENST00000527920 LINC00467Q9BRT7 94 aa23.29■■□□□ 1.32
SSSCA1-205ENST00000527920 IGKV2-40A0A087WW87 121 aaPredicted RBP23.28■■□□□ 1.32
SSSCA1-205ENST00000527920 TRBV7-9A0A0J9YWB2 115 aa23.28■■□□□ 1.32
SSSCA1-205ENST00000527920 IGKV2D-40P01614 121 aaPredicted RBP23.28■■□□□ 1.32
SSSCA1-205ENST00000527920 ACOT6Q3I5F7 207 aaPredicted RBP23.28■■□□□ 1.32
SSSCA1-205ENST00000527920 FRAS1Q86XX4 4008 aa23.27■■□□□ 1.32
SSSCA1-205ENST00000527920 GIPP09681 153 aaPredicted RBP23.27■■□□□ 1.32
SSSCA1-205ENST00000527920 ZNF266Q14584 549 aa23.27■■□□□ 1.32
SSSCA1-205ENST00000527920 RNF212Q495C1 297 aa23.27■■□□□ 1.32
SSSCA1-205ENST00000527920 VGLL1Q99990 258 aa23.27■■□□□ 1.32
SSSCA1-205ENST00000527920 ZNF324O75467 553 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-205ENST00000527920 CSN1S1P47710 185 aa23.26■■□□□ 1.31
SSSCA1-205ENST00000527920 ZNF492Q9P255 531 aa23.26■■□□□ 1.31
SSSCA1-205ENST00000527920 DNAH10Q8IVF4 4471 aa23.26■■□□□ 1.31
SSSCA1-205ENST00000527920 RBAKDNA6NC62 111 aa23.25■■□□□ 1.31
SSSCA1-205ENST00000527920 SNURFLB1AK76 121 aa23.25■■□□□ 1.31
SSSCA1-205ENST00000527920 RANP62826 216 aaKnown RBP23.25■■□□□ 1.31
SSSCA1-205ENST00000527920 ZFAND2AQ8N6M9 145 aa23.25■■□□□ 1.31
SSSCA1-205ENST00000527920 Q9H3A6 140 aa23.25■■□□□ 1.31
SSSCA1-205ENST00000527920 F5H768 121 aa23.24■■□□□ 1.31
SSSCA1-205ENST00000527920 DAZ2Q13117 558 aaKnown RBP23.24■■□□□ 1.31
SSSCA1-205ENST00000527920 PQLC2Q6ZP29 291 aa23.24■■□□□ 1.31
SSSCA1-205ENST00000527920 ZNF680Q8NEM1 530 aa23.24■■□□□ 1.31
SSSCA1-205ENST00000527920 GPX1P07203 203 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 ZNF138P52744 262 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 CD300CQ08708 224 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 BTN1A1Q13410 526 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 ANXA2RQ3ZCQ2 193 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 UBE2DNLQ8IWF7 75 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 OR2G3Q8NGZ4 309 aa23.23■■□□□ 1.31
SSSCA1-205ENST00000527920 A0A1W2PPV4 95 aa23.22■■□□□ 1.31
SSSCA1-205ENST00000527920 RNASE4P34096 147 aaKnown RBP23.21■■□□□ 1.31
SSSCA1-205ENST00000527920 RXFP4Q8TDU9 374 aa23.21■■□□□ 1.31
SSSCA1-205ENST00000527920 FAM3BP58499 235 aaPredicted RBP23.2■■□□□ 1.3
SSSCA1-205ENST00000527920 RAB2AP61019 212 aa23.2■■□□□ 1.3
SSSCA1-205ENST00000527920 EIF4E3Q8N5X7 224 aaKnown RBP23.2■■□□□ 1.3
SSSCA1-205ENST00000527920 PSMG3Q9BT73 122 aaPredicted RBP23.2■■□□□ 1.3
SSSCA1-205ENST00000527920 OTORQ9NRC9 128 aa23.2■■□□□ 1.3
SSSCA1-205ENST00000527920 RGS21Q2M5E4 152 aa23.19■■□□□ 1.3
SSSCA1-205ENST00000527920 ARL6IP6Q8N6S5 226 aa23.19■■□□□ 1.3
SSSCA1-205ENST00000527920 C11orf72Q8NBR9 251 aa23.19■■□□□ 1.3
SSSCA1-205ENST00000527920 LGALS9BQ3B8N2 356 aa23.18■■□□□ 1.3
SSSCA1-205ENST00000527920 Q5BKY6 102 aa23.18■■□□□ 1.3
SSSCA1-205ENST00000527920 OR10G4Q8NGN3 311 aa23.18■■□□□ 1.3
SSSCA1-205ENST00000527920 OR10G9Q8NGN4 311 aa23.18■■□□□ 1.3
SSSCA1-205ENST00000527920 OR10G7Q8NGN6 311 aa23.18■■□□□ 1.3
SSSCA1-205ENST00000527920 LENEPQ9Y5L5 61 aa23.18■■□□□ 1.3
SSSCA1-205ENST00000527920 DIRC3C9JPN6 131 aa23.17■■□□□ 1.3
SSSCA1-205ENST00000527920 PRR9Q5T870 116 aa23.17■■□□□ 1.3
SSSCA1-205ENST00000527920 TMED6Q8WW62 240 aa23.17■■□□□ 1.3
SSSCA1-205ENST00000527920 FAM74A1Q5RGS3 127 aa23.16■■□□□ 1.3
SSSCA1-205ENST00000527920 IBA57Q5T440 356 aaKnown RBP23.16■■□□□ 1.3
SSSCA1-205ENST00000527920 HSD17B11Q8NBQ5 300 aa23.16■■□□□ 1.3
SSSCA1-205ENST00000527920 Q8TAT8 98 aa23.16■■□□□ 1.3
SSSCA1-205ENST00000527920 GAGE12BA1L429 117 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 GAGE7O76087 117 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 GAGE12FP0CL80 117 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 GAGE12GP0CL81 117 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 GAGE12IP0CL82 117 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 SERF2P84101 59 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 INO80EQ8NBZ0 244 aaPredicted RBP23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 C18orf15Q96N68 181 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 GSN-AS1Q9NRJ2 163 aa23.15■■□□□ 1.3
SSSCA1-205ENST00000527920 EIF3GO75821 320 aaKnown RBP eCLIP23.14■■□□□ 1.29
SSSCA1-205ENST00000527920 MBP02144 154 aa23.14■■□□□ 1.29
SSSCA1-205ENST00000527920 ATP6V0CP27449 155 aa23.14■■□□□ 1.29
SSSCA1-205ENST00000527920 LINC00336Q6ZUF6 198 aa23.14■■□□□ 1.29
SSSCA1-205ENST00000527920 RGS13O14921 159 aa23.13■■□□□ 1.29
SSSCA1-205ENST00000527920 CDC34P49427 236 aaPredicted RBP23.13■■□□□ 1.29
SSSCA1-205ENST00000527920 TCL1AP56279 114 aa23.13■■□□□ 1.29
SSSCA1-205ENST00000527920 Q6ZTI0 123 aa23.13■■□□□ 1.29
SSSCA1-205ENST00000527920 CMTM2Q8TAZ6 248 aa23.13■■□□□ 1.29
SSSCA1-205ENST00000527920 IGHV1OR15-1A0A075B7D0 117 aa23.12■■□□□ 1.29
SSSCA1-205ENST00000527920 RNF222A6NCQ9 220 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 PGPA6NDG6 321 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 NUDT3O95989 172 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 STAG3L2P0CL84 134 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 STAG3L3P0CL85 134 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 Q6ZR54 194 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 OR2T35Q8NGX2 323 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 HYLS1Q96M11 299 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 ATG101Q9BSB4 218 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 TNFSF18Q9UNG2 199 aa23.11■■□□□ 1.29
SSSCA1-205ENST00000527920 FXYD6-FXYD2A0A087WZ82 144 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms