RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GPX1P07203 203 aa15.5■□□□□ 0.07
TRAPPC4-208ENST00000527680 PYYP10082 97 aa15.5■□□□□ 0.07
TRAPPC4-208ENST00000527680 SPATA12Q7Z6I5 190 aa15.5■□□□□ 0.07
TRAPPC4-208ENST00000527680 EXOC3-AS1Q8N2X6 119 aa15.5■□□□□ 0.07
TRAPPC4-208ENST00000527680 AGPAT4-IT1Q9H0P7 198 aa15.5■□□□□ 0.07
TRAPPC4-208ENST00000527680 CDK2AP2O75956 126 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 NDUFB4O95168 129 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 CD300CQ08708 224 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 BTN1A1Q13410 526 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 EIF4E3Q8N5X7 224 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 CHAC2Q8WUX2 184 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 UPK3BQ9BT76 320 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 Q9H3A6 140 aa15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 MRPS16Q9Y3D3 137 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-208ENST00000527680 MPDU1O75352 247 aa15.48■□□□□ 0.07
TRAPPC4-208ENST00000527680 PDE6HQ13956 83 aa15.48■□□□□ 0.07
TRAPPC4-208ENST00000527680 ICAM4Q14773 271 aa15.48■□□□□ 0.07
TRAPPC4-208ENST00000527680 KRTAP1-5Q9BYS1 174 aa15.48■□□□□ 0.07
TRAPPC4-208ENST00000527680 NDUFA13Q9P0J0 144 aa15.48■□□□□ 0.07
TRAPPC4-208ENST00000527680 FUT9Q9Y231 359 aa15.48■□□□□ 0.07
TRAPPC4-208ENST00000527680 RYR1P21817 5038 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 ZNF324O75467 553 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 IL15RAQ13261 267 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 GCSAMLQ5JQS6 135 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 TMEM78Q5T7P6 136 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 MZT2BQ6NZ67 158 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 FAM122CQ6P4D5 195 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 MAPKAPK5-AS1Q8N8E1 139 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 CCDC32Q9BV29 185 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 NPCDR1Q9BY65 106 aa15.47■□□□□ 0.07
TRAPPC4-208ENST00000527680 A0A1W2PPQ1 181 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 KLLNB2CW77 178 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 RGS13O14921 159 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 NHLH2Q02577 135 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 C11orf72Q8NBR9 251 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 VSIG2Q96IQ7 327 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 KLF12Q9Y4X4 402 aa15.46■□□□□ 0.07
TRAPPC4-208ENST00000527680 A0A096LPF7 62 aa15.45■□□□□ 0.06
TRAPPC4-208ENST00000527680 ANXA2RQ3ZCQ2 193 aa15.45■□□□□ 0.06
TRAPPC4-208ENST00000527680 C9orf47Q6ZRZ4 202 aa15.45■□□□□ 0.06
TRAPPC4-208ENST00000527680 THAP6Q8TBB0 222 aa15.45■□□□□ 0.06
TRAPPC4-208ENST00000527680 LINC00467Q9BRT7 94 aa15.45■□□□□ 0.06
TRAPPC4-208ENST00000527680 IGKV2-40A0A087WW87 121 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-208ENST00000527680 IGKV2D-40P01614 121 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-208ENST00000527680 NBEAP1P0C6P0 100 aa15.44■□□□□ 0.06
TRAPPC4-208ENST00000527680 FAM19A4Q96LR4 140 aa15.44■□□□□ 0.06
TRAPPC4-208ENST00000527680 SLC25A2Q9BXI2 301 aa15.44■□□□□ 0.06
TRAPPC4-208ENST00000527680 SLC25A31Q9H0C2 315 aa15.44■□□□□ 0.06
TRAPPC4-208ENST00000527680 PAX4O43316 350 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 IGHV3-53P01767 116 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 MIR17HGQ75NE6 70 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 OR5C1Q8NGR4 320 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 C18orf15Q96N68 181 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 VGLL1Q99990 258 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 ARPC5LQ9BPX5 153 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 OR51M1Q9H341 326 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 TP53TG3Q9ULZ0 132 aa15.43■□□□□ 0.06
TRAPPC4-208ENST00000527680 SPINK4O60575 86 aa15.42■□□□□ 0.06
TRAPPC4-208ENST00000527680 NMBP08949 121 aa15.42■□□□□ 0.06
TRAPPC4-208ENST00000527680 CRISP2P16562 243 aa15.42■□□□□ 0.06
TRAPPC4-208ENST00000527680 TCL1AP56279 114 aa15.42■□□□□ 0.06
TRAPPC4-208ENST00000527680 IGHV1OR15-1A0A075B7D0 117 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 SIX6O95475 246 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 LRRC37A5PQ49AS3 106 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 FAM167A-AS1Q96KT0 104 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 PAXXQ9BUH6 204 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 ZNF492Q9P255 531 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 ICOSQ9Y6W8 199 aa15.41■□□□□ 0.06
TRAPPC4-208ENST00000527680 E5RGE8 158 aa15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 SIVA1O15304 175 aa15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 OR10J4P0C629 311 aa15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 BTF3P20290 206 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 IBA57Q5T440 356 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 ZFAND2AQ8N6M9 145 aa15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 MRPL16Q9NX20 251 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 HSPG2P98160 4391 aa15.4■□□□□ 0.06
TRAPPC4-208ENST00000527680 CSN1S1P47710 185 aa15.39■□□□□ 0.05
TRAPPC4-208ENST00000527680 ZNF138P52744 262 aa15.39■□□□□ 0.05
TRAPPC4-208ENST00000527680 Q6ZQT7 251 aa15.39■□□□□ 0.05
TRAPPC4-208ENST00000527680 ST6GAL2Q96JF0 529 aa15.39■□□□□ 0.05
TRAPPC4-208ENST00000527680 KCNIP2Q9NS61 270 aa15.39■□□□□ 0.05
TRAPPC4-208ENST00000527680 LINC00315P59091 139 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 KRTAP10-2P60368 255 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 SLAQ13239 276 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 PRR9Q5T870 116 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 ENKURQ8TC29 256 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 MRPL32Q9BYC8 188 aaKnown RBP15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 OR5AC2Q9NZP5 309 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 PRO0255Q9UI72 69 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 HHLA3Q9XRX5 114 aa15.38■□□□□ 0.05
TRAPPC4-208ENST00000527680 C17orf112F2Z3M2 114 aa15.37■□□□□ 0.05
TRAPPC4-208ENST00000527680 OR7C2O60412 319 aa15.37■□□□□ 0.05
TRAPPC4-208ENST00000527680 RANP62826 216 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-208ENST00000527680 FXYD5Q96DB9 178 aa15.37■□□□□ 0.05
TRAPPC4-208ENST00000527680 PRAF2O60831 178 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 NXPH4O95158 308 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 ZNF415Q09FC8 603 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 ASAH1Q13510 395 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 MUC21Q5SSG8 566 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 Q8TAT8 98 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms