RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 RANP62826 216 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-217ENST00000527644 TMEM78Q5T7P6 136 aa18.69■□□□□ 0.58
TSPAN4-217ENST00000527644 CCDC28AQ8IWP9 274 aa18.69■□□□□ 0.58
TSPAN4-217ENST00000527644 INO80EQ8NBZ0 244 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-217ENST00000527644 IGKV2-40A0A087WW87 121 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-217ENST00000527644 IGKV2D-40P01614 121 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-217ENST00000527644 CSN1S1P47710 185 aa18.68■□□□□ 0.58
TSPAN4-217ENST00000527644 Q9H3A6 140 aa18.68■□□□□ 0.58
TSPAN4-217ENST00000527644 C7orf71A4D174 169 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 KLLNB2CW77 178 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 DEFB130BP0DP73 79 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 DEFB130AP0DP74 79 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 CRISP2P16562 243 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 RAB2AP61019 212 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 PQLC2Q6ZP29 291 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 HSD17B11Q8NBQ5 300 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 OR10G4Q8NGN3 311 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 OR10G9Q8NGN4 311 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 OR10G7Q8NGN6 311 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 OR2T35Q8NGX2 323 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 OR2G3Q8NGZ4 309 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 VGLL1Q99990 258 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 PYGO2Q9BRQ0 406 aa18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 PSMG3Q9BT73 122 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-217ENST00000527644 NMBP08949 121 aa18.66■□□□□ 0.58
TSPAN4-217ENST00000527644 FXYD6-FXYD2A0A087WZ82 144 aa18.65■□□□□ 0.58
TSPAN4-217ENST00000527644 EIF3GO75821 320 aaKnown RBP eCLIP18.65■□□□□ 0.58
TSPAN4-217ENST00000527644 NOP10Q9NPE3 64 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-217ENST00000527644 ZNF492Q9P255 531 aa18.65■□□□□ 0.58
TSPAN4-217ENST00000527644 TNFSF18Q9UNG2 199 aa18.65■□□□□ 0.58
TSPAN4-217ENST00000527644 EPPK1P58107 5090 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-217ENST00000527644 RBAKDNA6NC62 111 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 GPX1P07203 203 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 P0DMU3 169 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 FAM231AP0DMU4 169 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 FAM231CP0DMU5 169 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 ATP6V0CP27449 155 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 SERF2P84101 59 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 RXFP4Q8TDU9 374 aa18.64■□□□□ 0.57
TSPAN4-217ENST00000527644 TRBV7-9A0A0J9YWB2 115 aa18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 RNF222A6NCQ9 220 aa18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 CBY3A6NI87 242 aa18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 ZNF324O75467 553 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 MBP02144 154 aa18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 ZNF138P52744 262 aa18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 CD300CQ08708 224 aa18.63■□□□□ 0.57
TSPAN4-217ENST00000527644 RNASE4P34096 147 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-217ENST00000527644 BTN1A1Q13410 526 aa18.62■□□□□ 0.57
TSPAN4-217ENST00000527644 ZFAND2AQ8N6M9 145 aa18.62■□□□□ 0.57
TSPAN4-217ENST00000527644 LINC00467Q9BRT7 94 aa18.62■□□□□ 0.57
TSPAN4-217ENST00000527644 OTORQ9NRC9 128 aa18.62■□□□□ 0.57
TSPAN4-217ENST00000527644 ATP5G1P05496 136 aa18.61■□□□□ 0.57
TSPAN4-217ENST00000527644 ATP5G3P48201 142 aa18.61■□□□□ 0.57
TSPAN4-217ENST00000527644 CDC34P49427 236 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-217ENST00000527644 FAM74A1Q5RGS3 127 aa18.61■□□□□ 0.57
TSPAN4-217ENST00000527644 TMEM88Q6PEY1 159 aa18.61■□□□□ 0.57
TSPAN4-217ENST00000527644 BORCS7-ASMTA0A0B4J1R7 106 aa18.6■□□□□ 0.57
TSPAN4-217ENST00000527644 PGPA6NDG6 321 aa18.6■□□□□ 0.57
TSPAN4-217ENST00000527644 SNURFLB1AK76 121 aa18.6■□□□□ 0.57
TSPAN4-217ENST00000527644 DIRC3C9JPN6 131 aa18.6■□□□□ 0.57
TSPAN4-217ENST00000527644 HMGB3O15347 200 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 STAG3L2P0CL84 134 aa18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 STAG3L3P0CL85 134 aa18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 RPL7L1Q6DKI1 246 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 POM121L12Q8N7R1 296 aa18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 CMTM2Q8TAZ6 248 aa18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 GNPNAT1Q96EK6 184 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 HYLS1Q96M11 299 aa18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 DNAH6Q9C0G6 4158 aa18.59■□□□□ 0.57
TSPAN4-217ENST00000527644 F5H768 121 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 G3V3Q6 166 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 ANXA2RQ3ZCQ2 193 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 EIF4E3Q8N5X7 224 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 ARL6IP6Q8N6S5 226 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 LINC00612Q8N6U2 182 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 ZNF680Q8NEM1 530 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 Q8TAT8 98 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 RAB24Q969Q5 203 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 SH3BGRL3Q9H299 93 aa18.58■□□□□ 0.56
TSPAN4-217ENST00000527644 ARL14EPLP0DKL9 152 aa18.57■□□□□ 0.56
TSPAN4-217ENST00000527644 DAZ2Q13117 558 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-217ENST00000527644 PRR9Q5T870 116 aa18.57■□□□□ 0.56
TSPAN4-217ENST00000527644 C15orf53Q8NAA6 179 aa18.57■□□□□ 0.56
TSPAN4-217ENST00000527644 LENEPQ9Y5L5 61 aa18.57■□□□□ 0.56
TSPAN4-217ENST00000527644 TMED6Q8WW62 240 aa18.56■□□□□ 0.56
TSPAN4-217ENST00000527644 ACTR3CQ9C0K3 210 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-217ENST00000527644 TAAR5O14804 337 aa18.54■□□□□ 0.56
TSPAN4-217ENST00000527644 RGS13O14921 159 aa18.54■□□□□ 0.56
TSPAN4-217ENST00000527644 C11orf72Q8NBR9 251 aa18.54■□□□□ 0.56
TSPAN4-217ENST00000527644 SUN5Q8TC36 379 aa18.54■□□□□ 0.56
TSPAN4-217ENST00000527644 GSN-AS1Q9NRJ2 163 aa18.54■□□□□ 0.56
TSPAN4-217ENST00000527644 ARPC5O15511 151 aa18.53■□□□□ 0.56
TSPAN4-217ENST00000527644 GCHFRP30047 84 aa18.53■□□□□ 0.56
TSPAN4-217ENST00000527644 RPH3ALQ9UNE2 315 aa18.53■□□□□ 0.56
TSPAN4-217ENST00000527644 DNAH10Q8IVF4 4471 aa18.53■□□□□ 0.56
TSPAN4-217ENST00000527644 IGHV1OR15-1A0A075B7D0 117 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 GAGE12BA1L429 117 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 GAGE7O76087 117 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 CXorf1O96002 111 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 GAGE12FP0CL80 117 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms