RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NUP205Q92621 2012 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 WISP3O95389 354 aaPredicted RBP5.85□□□□□ -1.47
CTNND1-216ENST00000527467 C15orf32Q32M92 178 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 Q6ZT83 130 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 IGLL5B9A064 214 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 USP17L23D6RBM5 183 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 IGLC1P0CG04 106 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 CRYGSP22914 178 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 BTCP35070 178 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 ZNF493Q6ZR52 646 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 IGKV4-1P06312 121 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 CCL3L1P16619 93 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 FAM201AQ5SY85 155 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 FOXI2Q6ZQN5 318 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 PLXNA3P51805 1871 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 A0A1B0GUS0 222 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 TMEM213A2RRL7 107 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 IGKV1-5P01602 117 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 LINC01620Q4KN68 170 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 HIGD2BQ4VC39 106 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 DYNAPQ8N1N2 210 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 Q96MF0 132 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 FOXI1Q12951 378 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 RNF183Q96D59 192 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-216ENST00000527467 IL15RAQ13261 267 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 NSUN5P1Q3KNT7 163 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 LRRC75A-AS1Q8N1F1 130 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 SRXN1Q9BYN0 137 aa5.84□□□□□ -1.47
CTNND1-216ENST00000527467 TRBV7-1A0A0A6YYK4 115 aa5.84□□□□□ -1.48
CTNND1-216ENST00000527467 GATA3P23771 443 aa5.84□□□□□ -1.48
CTNND1-216ENST00000527467 PRR30Q53SZ7 412 aaPredicted RBP5.84□□□□□ -1.48
CTNND1-216ENST00000527467 ZNF497Q6ZNH5 498 aa5.84□□□□□ -1.48
CTNND1-216ENST00000527467 LINC00643Q86TS7 51 aa5.84□□□□□ -1.48
CTNND1-216ENST00000527467 LYPD6BQ8NI32 183 aa5.84□□□□□ -1.48
CTNND1-216ENST00000527467 COX7B2Q8TF08 81 aa5.84□□□□□ -1.48
CTNND1-216ENST00000527467 PFN1P07737 140 aaKnown RBP5.83□□□□□ -1.48
CTNND1-216ENST00000527467 EFNA4P52798 201 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 TMEM14EPQ6UXP3 125 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 RNASE8Q8TDE3 154 aaKnown RBP5.83□□□□□ -1.48
CTNND1-216ENST00000527467 MRPS18CQ9Y3D5 142 aaKnown RBP5.83□□□□□ -1.48
CTNND1-216ENST00000527467 DKK2Q9UBU2 259 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 TRIP11Q15643 1979 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 B4DSR2 109 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 CECR9P0C854 216 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 PDE6GP18545 87 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 ANKRD39Q53RE8 183 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 MLST8Q9BVC4 326 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 F5H768 121 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 ETV2O00321 342 aaPredicted RBP5.83□□□□□ -1.48
CTNND1-216ENST00000527467 MRPL51Q4U2R6 128 aaKnown RBP5.83□□□□□ -1.48
CTNND1-216ENST00000527467 RNF5Q99942 180 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 KIAA1671Q9BY89 1806 aa5.83□□□□□ -1.48
CTNND1-216ENST00000527467 VWC2Q2TAL6 325 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 LINC01356Q8N9X3 169 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 TMEM75Q8N9X5 138 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 RNF114Q9Y508 228 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 ICOSQ9Y6W8 199 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 TRPM6Q9BX84 2022 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 C17orf100A8MU93 164 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 YPEL3P61236 119 aaPredicted RBP5.82□□□□□ -1.48
CTNND1-216ENST00000527467 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 ATP6V0E2Q8NHE4 81 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 TIMM17AQ99595 171 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 C9JQL5 133 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 H3BT86 120 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 CD24P25063 80 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 DEFB121Q5J5C9 76 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 ZNRF2Q8NHG8 242 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 WIPF2Q8TF74 440 aaPredicted RBP5.82□□□□□ -1.48
CTNND1-216ENST00000527467 HEATR5BQ9P2D3 2071 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 ABCA7Q8IZY2 2146 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 ACACAQ13085 2346 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 IGLV3-12A0A075B6K2 115 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 IGHV4-4A0A075B6R2 117 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 HGFACQ04756 655 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 Q9H8V8 135 aa5.82□□□□□ -1.48
CTNND1-216ENST00000527467 DKK1O94907 266 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 HIST2H2BCQ6DN03 193 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 HIST2H2BDQ6DRA6 164 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 USMG5Q96IX5 58 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 FAM110AQ9BQ89 295 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 CNOT1A5YKK6 2376 aaKnown RBP5.81□□□□□ -1.48
CTNND1-216ENST00000527467 LYPD3O95274 346 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 CELA2AP08217 269 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 NDUFV3P56181 108 aaKnown RBP5.81□□□□□ -1.48
CTNND1-216ENST00000527467 NRTNQ99748 197 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 C20orf78Q9BR46 151 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 AHCTF1Q8WYP5 2266 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 TRBV10-2A0A0K0K1G8 114 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 SRSF7Q16629 238 aaKnown RBP eCLIP5.81□□□□□ -1.481e-6■■□□□ 13.9
CTNND1-216ENST00000527467 C10orf55Q5SWW7 151 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 LAIR2Q6ISS4 152 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 Q6ZVH6 145 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 C11orf44Q8N8P7 122 aa5.81□□□□□ -1.48
CTNND1-216ENST00000527467 LYZL4Q96KX0 146 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms