RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 CXorf1O96002 111 aa12.47□□□□□ -0.41
LTBP3-208ENST00000527339 IGKV2D-40P01614 121 aaPredicted RBP12.47□□□□□ -0.41
LTBP3-208ENST00000527339 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
LTBP3-208ENST00000527339 ERCC8Q13216 396 aa12.47□□□□□ -0.41
LTBP3-208ENST00000527339 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
LTBP3-208ENST00000527339 FAM74A1Q5RGS3 127 aa12.47□□□□□ -0.41
LTBP3-208ENST00000527339 AGPAT4-IT1Q9H0P7 198 aa12.47□□□□□ -0.41
LTBP3-208ENST00000527339 OTORQ9NRC9 128 aa12.47□□□□□ -0.41
LTBP3-208ENST00000527339 CTXND1A0A1B0GTU2 59 aa12.46□□□□□ -0.41
LTBP3-208ENST00000527339 RBAKDNA6NC62 111 aa12.46□□□□□ -0.41
LTBP3-208ENST00000527339 GCHFRP30047 84 aa12.46□□□□□ -0.41
LTBP3-208ENST00000527339 TMEM78Q5T7P6 136 aa12.46□□□□□ -0.41
LTBP3-208ENST00000527339 SUN5Q8TC36 379 aa12.46□□□□□ -0.41
LTBP3-208ENST00000527339 RXFP4Q8TDU9 374 aa12.46□□□□□ -0.41
LTBP3-208ENST00000527339 hCG_2014768A0A024R1R8 64 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 LOC102723971A0A1B0GUV8 181 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 PGPA6NDG6 321 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 SLC25A5P05141 298 aaKnown RBP12.45□□□□□ -0.42
LTBP3-208ENST00000527339 GFI1BQ5VTD9 330 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 ARL6IP6Q8N6S5 226 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
LTBP3-208ENST00000527339 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 VGLL1Q99990 258 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 ZNF471Q9BX82 626 aaPredicted RBP12.45□□□□□ -0.42
LTBP3-208ENST00000527339 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
LTBP3-208ENST00000527339 PFDN1O60925 122 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 C1QBP02746 253 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 EIF5AP63241 154 aaKnown RBP12.44□□□□□ -0.42
LTBP3-208ENST00000527339 KIR3DS1Q14943 382 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 ZNF726P1Q15940 193 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 CEMP1Q6PRD7 247 aaPredicted RBP12.44□□□□□ -0.42
LTBP3-208ENST00000527339 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 LINC01587Q99440 93 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 CELA1Q9UNI1 258 aa12.44□□□□□ -0.42
LTBP3-208ENST00000527339 TEX48A0A1B0GUV7 120 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
LTBP3-208ENST00000527339 DIRC3C9JPN6 131 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 H7BYZ3 331 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 J3KRW8 73 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 NMBP08949 121 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 SEC11BP0C7V7 166 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 CRISP2P16562 243 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 EMP1P54849 157 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 TAS2R60P59551 318 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 AKAP14Q86UN6 197 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 ZNF492Q9P255 531 aa12.43□□□□□ -0.42
LTBP3-208ENST00000527339 VPS13DQ5THJ4 4388 aa12.42□□□□□ -0.42
LTBP3-208ENST00000527339 TRBV7-9A0A0J9YWB2 115 aa12.42□□□□□ -0.42
LTBP3-208ENST00000527339 KLLNB2CW77 178 aa12.42□□□□□ -0.42
LTBP3-208ENST00000527339 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
LTBP3-208ENST00000527339 ZNF138P52744 262 aa12.42□□□□□ -0.42
LTBP3-208ENST00000527339 KLK5Q9Y337 293 aaPredicted RBP12.42□□□□□ -0.42
LTBP3-208ENST00000527339 HECTD4Q9Y4D8 3996 aa12.42□□□□□ -0.42
LTBP3-208ENST00000527339 C7orf71A4D174 169 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 C11orf94C9JXX5 98 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
LTBP3-208ENST00000527339 KIAA1109Q2LD37 5005 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 IQCF2Q8IXL9 164 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 NIPSNAP3BQ9BS92 247 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 RPH3ALQ9UNE2 315 aa12.41□□□□□ -0.42
LTBP3-208ENST00000527339 YTHDF2Q9Y5A9 579 aaKnown RBP12.41□□□□□ -0.42
LTBP3-208ENST00000527339 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 PRM2P04554 102 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 GPX1P07203 203 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 C12orf74Q32Q52 190 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
LTBP3-208ENST00000527339 FAM222AQ5U5X8 452 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 Q6ZTC4 211 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 ZFAND2AQ8N6M9 145 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 STOML3Q8TAV4 291 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 TMED6Q8WW62 240 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 C16orf74Q96GX8 76 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
LTBP3-208ENST00000527339 SERTM2A0A1B0GWG4 89 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 A0A1W2PRE2 83 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 HTN1P15515 57 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 AZU1P20160 251 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 ZNF493Q6ZR52 646 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 Q8TAT8 98 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
LTBP3-208ENST00000527339 PYGO2Q9BRQ0 406 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 RYR1P21817 5038 aa12.39□□□□□ -0.43
LTBP3-208ENST00000527339 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
LTBP3-208ENST00000527339 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-208ENST00000527339 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
LTBP3-208ENST00000527339 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-208ENST00000527339 SUMO1P63165 101 aaKnown RBP12.38□□□□□ -0.43
LTBP3-208ENST00000527339 GNG5P63218 68 aa12.38□□□□□ -0.43
LTBP3-208ENST00000527339 CD300CQ08708 224 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms