RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 TVP23CQ96ET8 276 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 C20orf173Q96LM9 149 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 NAT8Q9UHE5 227 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 C9JCJ5 164 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 GNG4P50150 75 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 FLI1Q01543 452 aaPredicted RBP9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 PSMG4Q5JS54 123 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 OR10J6PQ8NGY7 276 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 LINC00479Q96M42 142 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 NBEAL2Q6ZNJ1 2754 aa9.45□□□□□ -0.9
SSSCA1-203ENST00000526877 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 IZUMO1RA6ND01 250 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 SVBPQ8N300 66 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 FAM24BQ8N5W8 94 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 SGK494Q96LW2 274 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 SDF2L1Q9HCN8 221 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 LY96Q9Y6Y9 160 aa9.44□□□□□ -0.9
SSSCA1-203ENST00000526877 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 SNAPINO95295 136 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 C9orf47Q6ZRZ4 202 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 SMIM12Q96EX1 92 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 IGF2BP2-AS1Q96M15 143 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 LINC00477Q96M19 166 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 NDFIP1Q9BT67 221 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 ZFP30Q9Y2G7 519 aa9.43□□□□□ -0.9
SSSCA1-203ENST00000526877 M0R036 132 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 LTAP01374 205 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 IGLV2-11P01706 119 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 DEFB131AP59861 70 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 SAPCD1Q5SSQ6 148 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 Q86TA4 180 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 Q8N1Y9 231 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 OCC1Q8TAD7 63 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 ASCL2Q99929 193 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 VGLL1Q99990 258 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
SSSCA1-203ENST00000526877 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 NPIPB6E9PJ23 425 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 MGST1P10620 155 aaKnown RBP9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 ZNF138P52744 262 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 ERCC8Q13216 396 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 ADIRFQ15847 76 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 AGPAT4-IT1Q9H0P7 198 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 MAP6D1Q9H9H5 199 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 U3KQK5 164 aa9.41□□□□□ -0.9
SSSCA1-203ENST00000526877 KMT2CQ8NEZ4 4911 aaKnown RBP9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 OR11H12B2RN74 326 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 B4DEV8 164 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 F6UB75 175 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 LINC01551Q86U37 167 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 SAV1Q9H4B6 383 aaPredicted RBP9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 PPP1R14DQ9NXH3 145 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
SSSCA1-203ENST00000526877 A0A0J9YX75 114 aa9.39□□□□□ -0.91
SSSCA1-203ENST00000526877 FRMD6-AS1P0C7T7 363 aa9.39□□□□□ -0.91
SSSCA1-203ENST00000526877 DEFB1P60022 68 aa9.39□□□□□ -0.91
SSSCA1-203ENST00000526877 NHLRC2Q8NBF2 726 aa9.39□□□□□ -0.91
SSSCA1-203ENST00000526877 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
SSSCA1-203ENST00000526877 GCGP01275 180 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 CT45A10P0DMU9 189 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 RHEBQ15382 184 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 Q8TAT8 98 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 MLST8Q9BVC4 326 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
SSSCA1-203ENST00000526877 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms