RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
CPSF1-201ENST00000526271 KANTRA0A1W2PQU2 76 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 CBY3A6NI87 242 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 B2MP61769 119 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 Q6ZRG5 221 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-201ENST00000526271 OR8A1Q8NGG7 326 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 TMEM37Q8WXS4 190 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 GPR82Q96P67 336 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 SHANK2-AS3Q9BTD1 123 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 Q9H8V8 135 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
CPSF1-201ENST00000526271 HYPMO75409 117 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 DUSP14O95147 198 aaKnown RBP9.85□□□□□ -0.83
CPSF1-201ENST00000526271 ATP5G1P05496 136 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 ATP6V0CP27449 155 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 ATP5G3P48201 142 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 ESRGQ1W209 222 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 S100A7AQ86SG5 101 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 HSD17B11Q8NBQ5 300 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 OR1B1Q8NGR6 318 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 PSMG3Q9BT73 122 aaPredicted RBP9.85□□□□□ -0.83
CPSF1-201ENST00000526271 DNAJC4Q9NNZ3 241 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 KCNIP2Q9NS61 270 aa9.85□□□□□ -0.83
CPSF1-201ENST00000526271 NKX2-5P52952 324 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-201ENST00000526271 CCL18P55774 89 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 TAS2R60P59551 318 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 SERF2P84101 59 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 HIST1H1AQ02539 215 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-201ENST00000526271 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 OR2G3Q8NGZ4 309 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 GNPNAT1Q96EK6 184 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-201ENST00000526271 LINC01587Q99440 93 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 Q9H3A6 140 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 NOP10Q9NPE3 64 aaKnown RBP9.84□□□□□ -0.83
CPSF1-201ENST00000526271 HIGD1AQ9Y241 93 aa9.84□□□□□ -0.83
CPSF1-201ENST00000526271 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 A0A087X0K7 114 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 PRAC2D3DTV9 90 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
CPSF1-201ENST00000526271 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 STOML3Q8TAV4 291 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 PFDN5Q99471 154 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 UPK3BQ9BT76 320 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 ZNF471Q9BX82 626 aaPredicted RBP9.83□□□□□ -0.84
CPSF1-201ENST00000526271 SH3BGRL3Q9H299 93 aa9.83□□□□□ -0.84
CPSF1-201ENST00000526271 SRRM2Q9UQ35 2752 aaKnown RBP9.82□□□□□ -0.84
CPSF1-201ENST00000526271 A0A0J9YY99 117 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 COX7A2P2O60397 106 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 OR5G3P0C626 314 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 BTF3P20290 206 aaKnown RBP9.82□□□□□ -0.84
CPSF1-201ENST00000526271 XGP55808 180 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 EIF5AP63241 154 aaKnown RBP9.82□□□□□ -0.84
CPSF1-201ENST00000526271 GCSAMLQ5JQS6 135 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 FFAR4Q5NUL3 377 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 MORN5Q5VZ52 161 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 C10orf113Q5VZT2 155 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 LINC00305Q7Z4B0 112 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 SLC51BQ86UW2 128 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 RNF24Q9Y225 148 aa9.82□□□□□ -0.84
CPSF1-201ENST00000526271 SLC17A3O00476 420 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 SEC11BP0C7V7 166 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 TPT1P13693 172 aaKnown RBP9.81□□□□□ -0.84
CPSF1-201ENST00000526271 HTN1P15515 57 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 PSG3Q16557 428 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 RXFP4Q8TDU9 374 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 C16orf74Q96GX8 76 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 VSIG2Q96IQ7 327 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 BOLA1Q9Y3E2 137 aa9.81□□□□□ -0.84
CPSF1-201ENST00000526271 TIMM8BQ9Y5J9 83 aaPredicted RBP9.81□□□□□ -0.84
CPSF1-201ENST00000526271 MBP02144 154 aa9.8□□□□□ -0.84
CPSF1-201ENST00000526271 M6PRP20645 277 aa9.8□□□□□ -0.84
CPSF1-201ENST00000526271 ACOT6Q3I5F7 207 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-201ENST00000526271 GFI1BQ5VTD9 330 aa9.8□□□□□ -0.84
CPSF1-201ENST00000526271 TMEM256Q8N2U0 113 aa9.8□□□□□ -0.84
CPSF1-201ENST00000526271 TMEM263Q8WUH6 116 aaKnown RBP9.8□□□□□ -0.84
CPSF1-201ENST00000526271 H3BTX0 84 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 RPL7P18124 248 aaKnown RBP9.79□□□□□ -0.84
CPSF1-201ENST00000526271 LINC00315P59091 139 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 RHOBP62745 196 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 OR5I1Q13606 314 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 RPUSD4Q96CM3 377 aaKnown RBP9.79□□□□□ -0.84
CPSF1-201ENST00000526271 MRPL32Q9BYC8 188 aaKnown RBP9.79□□□□□ -0.84
CPSF1-201ENST00000526271 ZNF331Q9NQX6 463 aaPredicted RBP9.79□□□□□ -0.84
CPSF1-201ENST00000526271 ZNF586Q9NXT0 402 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 FUT9Q9Y231 359 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 MRPS16Q9Y3D3 137 aaKnown RBP9.79□□□□□ -0.84
CPSF1-201ENST00000526271 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
CPSF1-201ENST00000526271 A0A096LPF7 62 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 TRAV5A0A0B4J249 113 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 CDKN1BP46527 198 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 RAB2AP61019 212 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 ZNF493Q6ZR52 646 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 MIR17HGQ75NE6 70 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 LRRC20Q8TCA0 184 aa9.78□□□□□ -0.84
CPSF1-201ENST00000526271 ZNF503Q96F45 646 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms