RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 BTCP35070 178 aa16.35■□□□□ 0.21
USP47-205ENST00000525257 PFDN5Q99471 154 aa16.35■□□□□ 0.21
USP47-205ENST00000525257 TRBV19A0A075B6N1 114 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 DNAH10OSP0CZ25 163 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 CAV2P51636 162 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 TCL1AP56279 114 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 CDPF1Q6NVV7 123 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 ST6GAL2Q96JF0 529 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 FAM19A4Q96LR4 140 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 AGPAT4-IT1Q9H0P7 198 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 UQCC1Q9NVA1 299 aa16.34■□□□□ 0.21
USP47-205ENST00000525257 LINC00477Q96M19 166 aa16.33■□□□□ 0.2
USP47-205ENST00000525257 MRPL16Q9NX20 251 aaKnown RBP16.33■□□□□ 0.2
USP47-205ENST00000525257 WDR83OSQ9Y284 106 aa16.33■□□□□ 0.2
USP47-205ENST00000525257 MPDU1O75352 247 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 NDUFB4O95168 129 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 GPX1P07203 203 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 ZNF846Q147U1 533 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 Q5VSD8 79 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 SLC39A9Q9NUM3 307 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 TP53TG3Q9ULZ0 132 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 MYCBP2O75592 4640 aa16.32■□□□□ 0.2
USP47-205ENST00000525257 UBE2L5PA0A1B0GUS4 154 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 FAM24AA6NFZ4 105 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 CENPXA8MT69 81 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 FAM25EA8MYX2 175 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 BAXQ07812 192 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 EXOC3-AS1Q8N2X6 119 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 C12orf45Q8N5I9 185 aaPredicted RBP16.31■□□□□ 0.2
USP47-205ENST00000525257 PRO0255Q9UI72 69 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 PRELID1Q9Y255 219 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 TIMM9Q9Y5J7 89 aa16.31■□□□□ 0.2
USP47-205ENST00000525257 RGS13O14921 159 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 PYYP10082 97 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 RPL29P47914 159 aaKnown RBP16.3■□□□□ 0.2
USP47-205ENST00000525257 KRTAP10-1P60331 282 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 IBA57Q5T440 356 aaKnown RBP16.3■□□□□ 0.2
USP47-205ENST00000525257 PRR9Q5T870 116 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 LYPD5Q6UWN5 251 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 Q6ZQT7 251 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 NFE4Q86UQ8 179 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 BLNKQ8WV28 456 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 FRZBQ92765 325 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 C8orf49Q96NF6 230 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 TMEM14CQ9P0S9 112 aa16.3■□□□□ 0.2
USP47-205ENST00000525257 A0A087WTM6 91 aa16.29■□□□□ 0.2
USP47-205ENST00000525257 IGKV2-40A0A087WW87 121 aaPredicted RBP16.29■□□□□ 0.2
USP47-205ENST00000525257 IGKV2D-40P01614 121 aaPredicted RBP16.29■□□□□ 0.2
USP47-205ENST00000525257 HIST1H1EP10412 219 aaKnown RBP16.29■□□□□ 0.2
USP47-205ENST00000525257 CRISP2P16562 243 aa16.29■□□□□ 0.2
USP47-205ENST00000525257 CRYBA4P53673 196 aa16.29■□□□□ 0.2
USP47-205ENST00000525257 C20orf85Q9H1P6 137 aa16.29■□□□□ 0.2
USP47-205ENST00000525257 C11orf1Q9H5F2 150 aa16.29■□□□□ 0.2
USP47-205ENST00000525257 HHLA3Q9XRX5 114 aa16.29■□□□□ 0.2
USP47-205ENST00000525257 PRAF2O60831 178 aa16.28■□□□□ 0.2
USP47-205ENST00000525257 IFNA5P01569 189 aa16.28■□□□□ 0.2
USP47-205ENST00000525257 PDE6HQ13956 83 aa16.28■□□□□ 0.2
USP47-205ENST00000525257 VWC2Q2TAL6 325 aa16.28■□□□□ 0.2
USP47-205ENST00000525257 ZFAND2AQ8N6M9 145 aa16.28■□□□□ 0.2
USP47-205ENST00000525257 SDHCQ99643 169 aaPredicted RBP16.28■□□□□ 0.2
USP47-205ENST00000525257 VGLL1Q99990 258 aa16.28■□□□□ 0.2
USP47-205ENST00000525257 IGHV1OR15-1A0A075B7D0 117 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 SLAQ13239 276 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 FHL2Q14192 279 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 MRPL23Q16540 153 aaKnown RBP16.27■□□□□ 0.2
USP47-205ENST00000525257 TMEM78Q5T7P6 136 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 C9orf47Q6ZRZ4 202 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 ARPC5LQ9BPX5 153 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 AAMDCQ9H7C9 122 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 LY96Q9Y6Y9 160 aa16.27■□□□□ 0.2
USP47-205ENST00000525257 C5orf51A6NDU8 294 aa16.26■□□□□ 0.19
USP47-205ENST00000525257 FGF7P21781 194 aa16.26■□□□□ 0.19
USP47-205ENST00000525257 ICAM4Q14773 271 aa16.26■□□□□ 0.19
USP47-205ENST00000525257 FAM122CQ6P4D5 195 aa16.26■□□□□ 0.19
USP47-205ENST00000525257 NEGR1Q7Z3B1 354 aa16.26■□□□□ 0.19
USP47-205ENST00000525257 SRRM2Q9UQ35 2752 aaKnown RBP16.26■□□□□ 0.19
USP47-205ENST00000525257 TRAV9-2A0A087WT02 112 aa16.25■□□□□ 0.19
USP47-205ENST00000525257 IGSF23A1L1A6 192 aa16.25■□□□□ 0.19
USP47-205ENST00000525257 NMBP08949 121 aa16.25■□□□□ 0.19
USP47-205ENST00000525257 SULT1A1P50225 295 aa16.25■□□□□ 0.19
USP47-205ENST00000525257 CNPY1Q3B7I2 92 aa16.25■□□□□ 0.19
USP47-205ENST00000525257 GCSAMLQ5JQS6 135 aa16.25■□□□□ 0.19
USP47-205ENST00000525257 E5RGE8 158 aa16.24■□□□□ 0.19
USP47-205ENST00000525257 PVALBP20472 110 aaPredicted RBP16.24■□□□□ 0.19
USP47-205ENST00000525257 S100A11P31949 105 aa16.24■□□□□ 0.19
USP47-205ENST00000525257 S100A10P60903 97 aa16.24■□□□□ 0.19
USP47-205ENST00000525257 ZNF415Q09FC8 603 aa16.24■□□□□ 0.19
USP47-205ENST00000525257 WFDC10BQ8IUB3 73 aa16.24■□□□□ 0.19
USP47-205ENST00000525257 RBM38Q9H0Z9 239 aaKnown RBP16.24■□□□□ 0.19
USP47-205ENST00000525257 LYRM2Q9NU23 88 aaPredicted RBP16.24■□□□□ 0.19
USP47-205ENST00000525257 MSRB1Q9NZV6 116 aa16.24■□□□□ 0.19
USP47-205ENST00000525257 TRGV4A0A0C4DH28 118 aa16.23■□□□□ 0.19
USP47-205ENST00000525257 SMR3BP02814 79 aaPredicted RBP16.23■□□□□ 0.19
USP47-205ENST00000525257 IL7P13232 177 aa16.23■□□□□ 0.19
USP47-205ENST00000525257 STX12Q86Y82 276 aa16.23■□□□□ 0.19
USP47-205ENST00000525257 CHAC2Q8WUX2 184 aa16.23■□□□□ 0.19
USP47-205ENST00000525257 SLC25A2Q9BXI2 301 aa16.23■□□□□ 0.19
USP47-205ENST00000525257 ZNF492Q9P255 531 aa16.23■□□□□ 0.19
USP47-205ENST00000525257 FLG2Q5D862 2391 aaPredicted RBP16.23■□□□□ 0.19
USP47-205ENST00000525257 SRIP30626 198 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms