RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 C9orf47Q6ZRZ4 202 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 FLI1Q01543 452 aaPredicted RBP11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 PRNTQ86SH4 94 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 Q86TA4 180 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 STHQ8IWL8 128 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 Q8TAT8 98 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 CITED4Q96RK1 184 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 AGPAT4-IT1Q9H0P7 198 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 PARLQ9H300 379 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 PSG8Q9UQ74 426 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 KLF12Q9Y4X4 402 aa11.73□□□□□ -0.53
TSPAN4-213ENST00000524895 H3BMM0 161 aa11.72□□□□□ -0.53
TSPAN4-213ENST00000524895 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
TSPAN4-213ENST00000524895 ZNF138P52744 262 aa11.72□□□□□ -0.53
TSPAN4-213ENST00000524895 SLC7A5P1Q8MH63 180 aa11.72□□□□□ -0.53
TSPAN4-213ENST00000524895 LINC00477Q96M19 166 aa11.72□□□□□ -0.53
TSPAN4-213ENST00000524895 TAS2R60P59551 318 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 CENPWQ5EE01 88 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 SOHLH1Q5JUK2 328 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 Q8N1Y9 231 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 ZNF492Q9P255 531 aa11.71□□□□□ -0.53
TSPAN4-213ENST00000524895 TRBV6-1A0A0K0K1D8 114 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 CT45A10P0DMU9 189 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 GNG4P50150 75 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 KPRPQ5T749 579 aaPredicted RBP11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 IGF2BP2-AS1Q96M15 143 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 ASCL2Q99929 193 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
TSPAN4-213ENST00000524895 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 LTAP01374 205 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 SAPCD1Q5SSQ6 148 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 BAGE2Q86Y30 109 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 ODF3Q96PU9 254 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 SORL1Q92673 2214 aa11.69□□□□□ -0.54
TSPAN4-213ENST00000524895 A8MTW9 85 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 C9JCJ5 164 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 LEPP41159 167 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 CLUHP3Q96NS8 147 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 ZFP30Q9Y2G7 519 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 LENEPQ9Y5L5 61 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 MGAM2Q2M2H8 2515 aa11.68□□□□□ -0.54
TSPAN4-213ENST00000524895 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 F8W036 122 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 TSPOP30536 169 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 AMTNQ6UX39 209 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 NHLRC2Q8NBF2 726 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
TSPAN4-213ENST00000524895 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 J3KRW8 73 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 IGHV4-30-4P0DP06 118 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 TMEM183AQ8IXX5 376 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 SMIM12Q96EX1 92 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
TSPAN4-213ENST00000524895 LOC102724200A0A096LPH7 203 aaPredicted RBP11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 M0R2Z0 102 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 GPX1P07203 203 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 CRISP2P16562 243 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 ADCYAP1P18509 176 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 CDKN1BP46527 198 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 FXYD7P58549 80 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 TMEM241Q24JQ0 296 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 SMUG1Q53HV7 270 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 SEC11CQ9BY50 192 aa11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
TSPAN4-213ENST00000524895 AMBPP02760 352 aa11.64□□□□□ -0.55
TSPAN4-213ENST00000524895 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-213ENST00000524895 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
TSPAN4-213ENST00000524895 ZC2HC1AQ96GY0 325 aa11.64□□□□□ -0.55
TSPAN4-213ENST00000524895 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
TSPAN4-213ENST00000524895 NBEAL1Q6ZS30 2694 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 KLLNB2CW77 178 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms