RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 A8MWP6 167 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 DIRC3C9JPN6 131 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 IGLV2-11P01706 119 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 FOXA3P55318 350 aaPredicted RBP5.4□□□□□ -1.54
VPS11-201ENST00000524454 C16orf54Q6UWD8 224 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 LCNL1Q6ZST4 164 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 C18orf65Q6ZTR6 163 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 TSKUQ8WUA8 353 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 UBE2E2Q96LR5 201 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 DAZ1Q9NQZ3 744 aaKnown RBP5.4□□□□□ -1.54
VPS11-201ENST00000524454 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.54
VPS11-201ENST00000524454 PKD1L1Q8TDX9 2849 aa5.4□□□□□ -1.55
VPS11-201ENST00000524454 ZNF320A2RRD8 509 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 G3V4G9 280 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 LGALS9O00182 355 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 GATCO43716 136 aaKnown RBP5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BKO60814 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HLA-DQA1P01909 254 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 PRB2P02812 416 aaPredicted RBP5.39□□□□□ -1.55
VPS11-201ENST00000524454 TRGC2P03986 189 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BJP06899 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 PF4V1P10720 104 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BOP23527 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BBP33778 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BDP58876 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BCP62807 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 DEFA6Q01524 100 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST2H2BEQ16778 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.39□□□□□ -1.55
VPS11-201ENST00000524454 GOLT1AQ6ZVE7 132 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 GLMPQ8WWB7 406 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BHQ93079 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BNQ99877 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 HIST1H2BMQ99879 126 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 RPP21Q9H633 154 aaKnown RBP5.39□□□□□ -1.55
VPS11-201ENST00000524454 PEF1Q9UBV8 284 aaKnown RBP5.39□□□□□ -1.55
VPS11-201ENST00000524454 UFC1Q9Y3C8 167 aa5.39□□□□□ -1.55
VPS11-201ENST00000524454 XKRY2A2RUG3 117 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 IZUMO1RA6ND01 250 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 ZNF705GA8MUZ8 300 aaPredicted RBP5.38□□□□□ -1.55
VPS11-201ENST00000524454 SLC17A3O00476 420 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 P01737 135 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 LGALS1P09382 135 aaKnown RBP5.38□□□□□ -1.55
VPS11-201ENST00000524454 CT45A10P0DMU9 189 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 MGST1P10620 155 aaKnown RBP5.38□□□□□ -1.55
VPS11-201ENST00000524454 HOXA5P20719 270 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 CDX1P47902 265 aaPredicted RBP5.38□□□□□ -1.55
VPS11-201ENST00000524454 GNG5P63218 68 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 NDUFA11Q86Y39 141 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 EXOC3-AS1Q8N2X6 119 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 OR4X2Q8NGF9 303 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 DAZAP1Q96EP5 407 aaKnown RBP5.38□□□□□ -1.55
VPS11-201ENST00000524454 NUDT11Q96G61 164 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 LINC00479Q96M42 142 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 MS4A10Q96PG2 267 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 NDFIP1Q9BT67 221 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 RNASE7Q9H1E1 156 aaKnown RBP5.38□□□□□ -1.55
VPS11-201ENST00000524454 GNB4Q9HAV0 340 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 C19orf73Q9NVV2 129 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 PSG8Q9UQ74 426 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 SMAD5-AS1Q9Y6J3 95 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 S4R3C0 116 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 VWFP04275 2813 aa5.38□□□□□ -1.55
VPS11-201ENST00000524454 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 CHEK1O14757 476 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 IGHV3-23P01764 117 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 TRGC1P0CF51 173 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 SMIM6P0DI80 62 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 RPS20P60866 119 aaKnown RBP5.37□□□□□ -1.55
VPS11-201ENST00000524454 OR5I1Q13606 314 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 DNLZQ5SXM8 178 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 RBPMS2Q6ZRY4 209 aaKnown RBP5.37□□□□□ -1.55
VPS11-201ENST00000524454 GBGT1Q8N5D6 347 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 FRZBQ92765 325 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 PACRGQ96M98 296 aaPredicted RBP5.37□□□□□ -1.55
VPS11-201ENST00000524454 C17orf77Q96MU5 243 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 DUX3Q96PT4 197 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 AURKAIP1Q9NWT8 199 aaPredicted RBP5.37□□□□□ -1.55
VPS11-201ENST00000524454 WNK1Q9H4A3 2382 aa5.37□□□□□ -1.55
VPS11-201ENST00000524454 TRAV2A0A0B4J234 112 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 TRAV34A0A0B4J273 112 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 A0A1B0GXF2 115 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 OVOL1O14753 267 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 ESDP10768 282 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 SNRPEP62304 92 aaKnown RBP5.36□□□□□ -1.55
VPS11-201ENST00000524454 FABP9Q0Z7S8 132 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 DEFB136Q30KP8 78 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 FAM162BQ5T6X4 162 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 LCN12Q6JVE5 192 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 C9orf47Q6ZRZ4 202 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 PRR25Q96S07 402 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 KLK15Q9H2R5 256 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 NRN1Q9NPD7 142 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 TRAPPC1Q9Y5R8 145 aa5.36□□□□□ -1.55
VPS11-201ENST00000524454 TSSC4Q9Y5U2 329 aaPredicted RBP5.36□□□□□ -1.55
VPS11-201ENST00000524454 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms