RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 BRWD1Q9NSI6 2320 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 USF3Q68DE3 2245 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 CD300LBA8K4G0 201 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 DLEU1O43261 78 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 PDE6DO43924 150 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 ZNF737O75373 536 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 OR7C1O76099 320 aaPredicted RBP3.31□□□□□ -1.88
SKP1-213ENST00000524288 IGKV1D-33P01593 117 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 IGKV1-33P01594 117 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 GYPAP02724 150 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 SCTP09683 121 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 OR10J1P30954 320 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 CEBPGP53567 150 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 CEACAM21Q3KPI0 293 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 SPIN3Q5JUX0 258 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 LCN15Q6UWW0 184 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 IGFL3Q6UXB1 125 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 RPS19BP1Q86WX3 136 aaKnown RBP3.31□□□□□ -1.88
SKP1-213ENST00000524288 RNF182Q8N6D2 247 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 DEFB124Q8NES8 71 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 OR5A2Q8NGI9 324 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 FAM57AQ8TBR7 257 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 BLNKQ8WV28 456 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 OR5P3Q8WZ94 311 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 FMC1Q96HJ9 113 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 OR4C12Q96R67 309 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 KCNIP2Q9NS61 270 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 FKBP11Q9NYL4 201 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 PSENENQ9NZ42 101 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 NAGKQ9UJ70 344 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 FUT9Q9Y231 359 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 INSIG2Q9Y5U4 225 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 PXMP4Q9Y6I8 212 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 KNL1Q8NG31 2342 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 DYSFO75923 2080 aa3.31□□□□□ -1.88
SKP1-213ENST00000524288 FREM1Q5H8C1 2179 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 IGLV2-18A0A075B6J9 118 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 C9JCJ5 164 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 HSBP1L1C9JCN9 74 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 TRAPPC2LH3BP13 241 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 OR7C2O60412 319 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 CBR3O75828 277 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 REG1AP05451 166 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 OR4A8P0C604 315 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 CCL3P10147 92 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 COX6A1P12074 109 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 NPPCP23582 126 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 ERVS71-1P61550 626 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 ATP5G2Q06055 141 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 Q0VG73 95 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 CEACAM16Q2WEN9 425 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 TOMM20LQ6UXN7 152 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 AAED1Q7RTV5 226 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 Q8IYB0 196 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 OR10J5Q8NHC4 309 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 RMI2Q96E14 147 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 CIB3Q96Q77 187 aaPredicted RBP3.3□□□□□ -1.88
SKP1-213ENST00000524288 MIEN1Q9BRT3 115 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 SLC39A9Q9NUM3 307 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 MPC1Q9Y5U8 109 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
SKP1-213ENST00000524288 U3KQA8 63 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 DOCK11Q5JSL3 2073 aa3.3□□□□□ -1.88
SKP1-213ENST00000524288 SVILO95425 2214 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 IGHV3-15A0A0B4J1V0 119 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 LOC389332A0A1B0GUA5 103 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 UBE2L5PA0A1B0GUS4 154 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 SPAARA0A1B0GVQ0 90 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 C17orf112F2Z3M2 114 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 H3BP45 60 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 LHBP01229 141 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 MT-ND6P03923 174 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 OR10J4P0C629 311 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 IAPPP10997 89 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 CDC34P49427 236 aaPredicted RBP3.29□□□□□ -1.88
SKP1-213ENST00000524288 IDH3GP51553 393 aaPredicted RBP3.29□□□□□ -1.88
SKP1-213ENST00000524288 TPPP2P59282 170 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 GNG3P63215 75 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 USF2Q15853 346 aaPredicted RBP3.29□□□□□ -1.88
SKP1-213ENST00000524288 Q6ZT83 130 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 FAM231DQ6ZW35 169 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 OR4B1Q8NGF8 309 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 OR51H1Q8NH63 302 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 PSMF1Q92530 271 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 TMEM208Q9BTX3 173 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 NPCDR1Q9BY65 106 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 CBLN4Q9NTU7 201 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 TMEM106BQ9NUM4 274 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 RBM12B-AS1Q9P1G2 102 aa3.29□□□□□ -1.88
SKP1-213ENST00000524288 CACNA1GO43497 2377 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 MDFIC2A0A1B0GVS7 189 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 ODAMA1E959 279 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 FNDC10F2Z333 226 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 CDIPTO14735 213 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 SYNGR1O43759 233 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 CXorf1O96002 111 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 KRASP01116 189 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms