RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 HIST1H1EP10412 219 aaKnown RBP12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 VSIG2Q96IQ7 327 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 Q9H3A6 140 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 HBG1P69891 147 aa12.97□□□□□ -0.33
PTP4A3-206ENST00000524028 HBG2P69892 147 aa12.97□□□□□ -0.33
PTP4A3-206ENST00000524028 STX12Q86Y82 276 aa12.97□□□□□ -0.33
PTP4A3-206ENST00000524028 BLNKQ8WV28 456 aa12.97□□□□□ -0.33
PTP4A3-206ENST00000524028 MRPS16Q9Y3D3 137 aaKnown RBP12.97□□□□□ -0.33
PTP4A3-206ENST00000524028 TIMM9Q9Y5J7 89 aa12.97□□□□□ -0.33
PTP4A3-206ENST00000524028 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 ATP6V1FQ16864 119 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 Q6ZQT7 251 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 LINC00467Q9BRT7 94 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 SLC25A2Q9BXI2 301 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 NPCDR1Q9BY65 106 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 PRELID1Q9Y255 219 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
PTP4A3-206ENST00000524028 A0A096LPF7 62 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 NHLH2Q02577 135 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 PDE6HQ13956 83 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 TTC32Q5I0X7 151 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 SPATA12Q7Z6I5 190 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 ZNF680Q8NEM1 530 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 FAM167A-AS1Q96KT0 104 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 C18orf15Q96N68 181 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 CCDC32Q9BV29 185 aa12.95□□□□□ -0.34
PTP4A3-206ENST00000524028 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 IGKV2-40A0A087WW87 121 aaPredicted RBP12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 FAM240BA0A1B0GVZ2 78 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 MPDU1O75352 247 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 IGKV2D-40P01614 121 aaPredicted RBP12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 CRISP2P16562 243 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 ICAM4Q14773 271 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 PRR9Q5T870 116 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 EIF4E3Q8N5X7 224 aaKnown RBP12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 THAP6Q8TBB0 222 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 VGLL1Q99990 258 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 TP53TG3Q9ULZ0 132 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
PTP4A3-206ENST00000524028 TRGV1A0A0A0MS02 117 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 A0A1W2PPQ1 181 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 SPINK4O60575 86 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 KRTAP10-2P60368 255 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 FAM122CQ6P4D5 195 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 MIR17HGQ75NE6 70 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 MAPKAPK5-AS1Q8N8E1 139 aa12.93□□□□□ -0.34
PTP4A3-206ENST00000524028 DNAH5Q8TE73 4624 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 SIX6O95475 246 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 GPX1P07203 203 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 TCL1AP56279 114 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 OR5C1Q8NGR4 320 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 NDUFA13Q9P0J0 144 aa12.92□□□□□ -0.34
PTP4A3-206ENST00000524028 APOBP04114 4563 aaKnown RBP12.91□□□□□ -0.34
PTP4A3-206ENST00000524028 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
PTP4A3-206ENST00000524028 NMBP08949 121 aa12.9□□□□□ -0.34
PTP4A3-206ENST00000524028 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
PTP4A3-206ENST00000524028 FXYD5Q96DB9 178 aa12.9□□□□□ -0.34
PTP4A3-206ENST00000524028 OR51M1Q9H341 326 aa12.9□□□□□ -0.34
PTP4A3-206ENST00000524028 OR5AC2Q9NZP5 309 aa12.9□□□□□ -0.34
PTP4A3-206ENST00000524028 ZNF492Q9P255 531 aa12.9□□□□□ -0.34
PTP4A3-206ENST00000524028 H0YIZ8 118 aa12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 OR10J4P0C629 311 aa12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 ASAH1Q13510 395 aa12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 IBA57Q5T440 356 aaKnown RBP12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 TMEM78Q5T7P6 136 aa12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 MZT2BQ6NZ67 158 aa12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 MRPL16Q9NX20 251 aaKnown RBP12.89□□□□□ -0.35
PTP4A3-206ENST00000524028 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 RGS13O14921 159 aa12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 LINC00315P59091 139 aa12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 Q8TAT8 98 aa12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 PHYHIPLQ96FC7 376 aa12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 ST6GAL2Q96JF0 529 aa12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
PTP4A3-206ENST00000524028 E5RGE8 158 aa12.87□□□□□ -0.35
PTP4A3-206ENST00000524028 PAX4O43316 350 aa12.87□□□□□ -0.35
PTP4A3-206ENST00000524028 LRRC37A5PQ49AS3 106 aa12.87□□□□□ -0.35
PTP4A3-206ENST00000524028 Q6ZRN7 208 aaPredicted RBP12.87□□□□□ -0.35
PTP4A3-206ENST00000524028 PAXXQ9BUH6 204 aa12.87□□□□□ -0.35
PTP4A3-206ENST00000524028 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
PTP4A3-206ENST00000524028 ZNF138P52744 262 aa12.86□□□□□ -0.35
PTP4A3-206ENST00000524028 Q8N1X5 172 aa12.86□□□□□ -0.35
PTP4A3-206ENST00000524028 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
PTP4A3-206ENST00000524028 NMES1Q9C002 83 aa12.86□□□□□ -0.35
PTP4A3-206ENST00000524028 SIVA1O15304 175 aa12.85□□□□□ -0.35
PTP4A3-206ENST00000524028 NXPH4O95158 308 aa12.85□□□□□ -0.35
PTP4A3-206ENST00000524028 FHL2Q14192 279 aa12.85□□□□□ -0.35
PTP4A3-206ENST00000524028 LINC00299Q6ZSB3 139 aa12.85□□□□□ -0.35
PTP4A3-206ENST00000524028 ICOSQ9Y6W8 199 aa12.85□□□□□ -0.35
PTP4A3-206ENST00000524028 CRYBA4P53673 196 aa12.84□□□□□ -0.35
PTP4A3-206ENST00000524028 RANP62826 216 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms