RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-222	ENST00000523530	ERVFC1-1	P60608	527 aa		12.07	□□□□□ -0.48
DENND3-222	ENST00000523530	PSMG4	Q5JS54	123 aa		12.07	□□□□□ -0.48
DENND3-222	ENST00000523530	FAM24B	Q8N5W8	94 aa		12.07	□□□□□ -0.48
DENND3-222	ENST00000523530	ASCL2	Q99929	193 aa		12.07	□□□□□ -0.48
DENND3-222	ENST00000523530	NDFIP1	Q9BT67	221 aa		12.07	□□□□□ -0.48
DENND3-222	ENST00000523530	MLST8	Q9BVC4	326 aa		12.07	□□□□□ -0.48
DENND3-222	ENST00000523530	TRAV25	A0A0B4J276	109 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530		H7BYZ3	331 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530	SAPCD1	Q5SSQ6	148 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530	C15orf54	Q8N8G6	183 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530	LINC00482	Q8N8I6	264 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530	OR10G8	Q8NGN5	311 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530		Q8TAT8	98 aa		12.06	□□□□□ -0.48
DENND3-222	ENST00000523530	ZNF705D	P0CH99	300 aa	Predicted RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	ZNF705B	P0CI00	300 aa	Predicted RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	IBA57	Q5T440	356 aa	Known RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	C9orf47	Q6ZRZ4	202 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	PRR25	Q96S07	402 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	SPAG8	Q99932	426 aa	Predicted RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	AGPAT4-IT1	Q9H0P7	198 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	RNASE7	Q9H1E1	156 aa	Known RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	TMEM242	Q9NWH2	141 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	OR4C46	A6NHA9	309 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	ZNF138	P52744	262 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	HIST1H1A	Q02539	215 aa	Predicted RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	OR8A1	Q8NGG7	326 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	C8orf49	Q96NF6	230 aa		12.05	□□□□□ -0.48
DENND3-222	ENST00000523530	MAST4	O15021	2626 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530		F6UB75	175 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	CT45A10	P0DMU9	189 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	DEFB1	P60022	68 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	TMEM158	Q8WZ71	300 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	DAZAP1	Q96EP5	407 aa	Known RBP	12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	ZC2HC1A	Q96GY0	325 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	LINC00477	Q96M19	166 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	OSTC	Q9NRP0	149 aa		12.04	□□□□□ -0.48
DENND3-222	ENST00000523530	SETD2	Q9BYW2	2564 aa	Predicted RBP	12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	IZUMO1R	A6ND01	250 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	CXorf65	A6NEN9	183 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	NPIPB6	E9PJ23	425 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	C12orf54	Q6X4T0	127 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	FAM231D	Q6ZW35	169 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	C3orf56	Q8N813	242 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	ZNF747	Q9BV97	191 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	GPR61	Q9BZJ8	451 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	ZNF492	Q9P255	531 aa		12.03	□□□□□ -0.48
DENND3-222	ENST00000523530	GATC	O43716	136 aa	Known RBP	12.02	□□□□□ -0.49
DENND3-222	ENST00000523530	SMUG1	Q53HV7	270 aa		12.02	□□□□□ -0.49
DENND3-222	ENST00000523530	EBLN2	Q6P2I7	272 aa		12.02	□□□□□ -0.49
DENND3-222	ENST00000523530	OR2K2	Q8NGT1	345 aa		12.02	□□□□□ -0.49
DENND3-222	ENST00000523530	TUBA4B	Q9H853	241 aa		12.02	□□□□□ -0.49
DENND3-222	ENST00000523530	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	IGLV1-51	P01701	117 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	S100P	P25815	95 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	NUDT10	Q8NFP7	164 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	NUDT11	Q96G61	164 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	PPP1R14D	Q9NXH3	145 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	URGCP-MRPS24	S4R325	110 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530		P01737	135 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	CD33	P20138	364 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	DEFB131A	P59861	70 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	LENEP	Q9Y5L5	61 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530		V9GYV3	84 aa		12.01	□□□□□ -0.49
DENND3-222	ENST00000523530	TEP1	Q99973	2627 aa	Known RBP	12	□□□□□ -0.49
DENND3-222	ENST00000523530		A0A0J9YX75	114 aa		12	□□□□□ -0.49
DENND3-222	ENST00000523530	C19orf71	A6NCJ1	209 aa		12	□□□□□ -0.49
DENND3-222	ENST00000523530	KCNIP4	Q6PIL6	250 aa		12	□□□□□ -0.49
DENND3-222	ENST00000523530	LINC00322	Q6ZN03	302 aa	Predicted RBP	12	□□□□□ -0.49
DENND3-222	ENST00000523530	COX8C	Q7Z4L0	72 aa		12	□□□□□ -0.49
DENND3-222	ENST00000523530	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12	□□□□□ -0.49
DENND3-222	ENST00000523530	WNK1	Q9H4A3	2382 aa		11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	DUSP14	O95147	198 aa	Known RBP	11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	FAM162B	Q5T6X4	162 aa		11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	GDF5OS	Q5U4N7	250 aa		11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	SHISA2	Q6UWI4	295 aa		11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	FOXI2	Q6ZQN5	318 aa		11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	SAV1	Q9H4B6	383 aa	Predicted RBP	11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	MAP6D1	Q9H9H5	199 aa		11.99	□□□□□ -0.49
DENND3-222	ENST00000523530	C9orf66	Q5T8R8	295 aa		11.98	□□□□□ -0.49
DENND3-222	ENST00000523530	RPP21	Q9H633	154 aa	Known RBP	11.98	□□□□□ -0.49
DENND3-222	ENST00000523530	IL36B	Q9NZH7	164 aa		11.98	□□□□□ -0.49
DENND3-222	ENST00000523530	SH2D1A	O60880	128 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	CRIP1	P50238	77 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	INSL3	P51460	131 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	ELOB	Q15370	118 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	JMJD1C	Q15652	2540 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	OR4B1	Q8NGF8	309 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	IMMP2L	Q96T52	175 aa		11.97	□□□□□ -0.49
DENND3-222	ENST00000523530	TRBV7-9	A0A0J9YWB2	115 aa		11.96	□□□□□ -0.49
DENND3-222	ENST00000523530		J3KRW8	73 aa		11.96	□□□□□ -0.49
DENND3-222	ENST00000523530	IGKV3-20	P01619	116 aa		11.96	□□□□□ -0.49
DENND3-222	ENST00000523530	ZNF80	P51504	273 aa	Predicted RBP	11.96	□□□□□ -0.49
DENND3-222	ENST00000523530	ACTL10	Q5JWF8	245 aa		11.96	□□□□□ -0.49
DENND3-222	ENST00000523530	KNCN	A6PVL3	124 aa		11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	FABP5P3	A8MUU1	101 aa		11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	OR11H12	B2RN74	326 aa		11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	CA1	P00915	261 aa	Predicted RBP	11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	PFN1	P07737	140 aa	Known RBP	11.96	□□□□□ -0.5
DENND3-222	ENST00000523530	CMC4	P56277	68 aa	Predicted RBP	11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms