RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RABL2BQ9UNT1 228 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 PXMP4Q9Y6I8 212 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 A0A087WXM4 84 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 CTDSP2O14595 271 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 AGPAT2O15120 278 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 OR4E1P0C645 316 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 ANXA2RQ3ZCQ2 193 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 MUC21Q5SSG8 566 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 PRR9Q5T870 116 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 RAB2BQ8WUD1 216 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 BLNKQ8WV28 456 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 SOSTQ9BQB4 213 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 DNAJC4Q9NNZ3 241 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 MGAT4CQ9UBM8 478 aa7.73□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV1OR15-1A0A075B7D0 117 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV3-16A0A0C4DH30 117 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 ANKRD20A5PA0PJZ0 165 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 SCGB1D2O95969 90 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 MRPS10P82664 201 aaKnown RBP7.72□□□□□ -1.17
SDCBP-211ENST00000523441 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 C10orf113Q5VZT2 155 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 LRTM2Q8N967 370 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 OR10P1Q8NGE3 313 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 ODF3Q96PU9 254 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 TXNDC17Q9BRA2 123 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 SLC25A31Q9H0C2 315 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
SDCBP-211ENST00000523441 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-211ENST00000523441 DUXBA0A1W2PPF3 345 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 K7EP13 123 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-211ENST00000523441 IGLC2P0DOY2 106 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 TMEM37Q8WXS4 190 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 SAT2Q96F10 170 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-211ENST00000523441 DIRAS2Q96HU8 199 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 NPVFQ9HCQ7 196 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 RNF24Q9Y225 148 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 PKHD1L1Q86WI1 4243 aa7.71□□□□□ -1.18
SDCBP-211ENST00000523441 KLLNB2CW77 178 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 C9JCJ5 164 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 C1QBP02746 253 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 ORM1P02763 201 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 SLC25A6P12236 298 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 IBA57Q5T440 356 aaKnown RBP7.7□□□□□ -1.18
SDCBP-211ENST00000523441 Q6ZSA8 131 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 ZNF546Q86UE3 836 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 EXOC3-AS1Q8N2X6 119 aa7.7□□□□□ -1.18
SDCBP-211ENST00000523441 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 RBFOX3A6NFN3 312 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-211ENST00000523441 PPP1R1AQ13522 171 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 TMEM128Q5BJH2 165 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 FAM122CQ6P4D5 195 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 Q8N3U1 123 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 Q8TAT8 98 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 BAALCQ8WXS3 180 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 TIMM9Q9Y5J7 89 aa7.69□□□□□ -1.18
SDCBP-211ENST00000523441 RNF213Q63HN8 5207 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 PIGBOS1A0A0B4J2F0 54 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 SFT2D2O95562 160 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 TNFSF8P32971 234 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 TMEM183BQ1AE95 376 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 MIC13Q5XKP0 118 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 OR4C5Q8NGB2 326 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 MCFD2Q8NI22 146 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 MGST2Q99735 147 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 SRRQ9GZT4 340 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 NAGKQ9UJ70 344 aa7.68□□□□□ -1.18
SDCBP-211ENST00000523441 RS1O15537 224 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 PYYP10082 97 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
SDCBP-211ENST00000523441 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 CTF1Q16619 201 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 GUK1Q16774 197 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 PXDC1Q5TGL8 231 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 C9orf47Q6ZRZ4 202 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 ZFAND2AQ8N6M9 145 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
SDCBP-211ENST00000523441 CTDSPLO15194 276 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 ASIPP42127 132 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 CAMLGP49069 296 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
SDCBP-211ENST00000523441 Q6ZRG5 221 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 OR10G4Q8NGN3 311 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 SMIM8Q96KF7 97 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 FAM19A4Q96LR4 140 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 CHAC1Q9BUX1 264 aa7.66□□□□□ -1.18
SDCBP-211ENST00000523441 TRBV19A0A075B6N1 114 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 IGHV3-73A0A0B4J1V6 119 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 K7EPK0 472 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 HIST1H1EP10412 219 aaKnown RBP7.65□□□□□ -1.18
SDCBP-211ENST00000523441 ID3Q02535 119 aa7.65□□□□□ -1.18
SDCBP-211ENST00000523441 ZNF846Q147U1 533 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms