RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 V9GYV3 84 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 LINC00469Q8N7U9 141 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 ZC2HC1AQ96GY0 325 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 OSTCQ9NRP0 149 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 ZFP30Q9Y2G7 519 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 SETD2Q9BYW2 2564 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 PCP4L1A6NKN8 68 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 CSN3P07498 182 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 NUDT10Q8NFP7 164 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 NUDT11Q96G61 164 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 SAV1Q9H4B6 383 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
CTNNA1-236ENST00000522792 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-236ENST00000522792 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-236ENST00000522792 S100PP25815 95 aa11.63□□□□□ -0.55
CTNNA1-236ENST00000522792 S100A12P80511 92 aa11.63□□□□□ -0.55
CTNNA1-236ENST00000522792 GPR61Q9BZJ8 451 aa11.63□□□□□ -0.55
CTNNA1-236ENST00000522792 A0A1W2PPQ1 181 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 RBAKDNA6NC62 111 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 DYNLRB2Q8TF09 96 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 PRR25Q96S07 402 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 F6UB75 175 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 FAM231DQ6ZW35 169 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 AGPAT4-IT1Q9H0P7 198 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 IL36BQ9NZH7 164 aa11.62□□□□□ -0.55
CTNNA1-236ENST00000522792 OVOL1O14753 267 aa11.61□□□□□ -0.55
CTNNA1-236ENST00000522792 ZNF688P0C7X2 276 aa11.61□□□□□ -0.55
CTNNA1-236ENST00000522792 RAB5AP20339 215 aa11.61□□□□□ -0.55
CTNNA1-236ENST00000522792 ID1P41134 155 aa11.61□□□□□ -0.55
CTNNA1-236ENST00000522792 KCNIP4Q6PIL6 250 aa11.61□□□□□ -0.55
CTNNA1-236ENST00000522792 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 K7EQG2 157 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 SAPCD1Q5SSQ6 148 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 BIN3Q9NQY0 253 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 ZNF492Q9P255 531 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 C2CD3Q4AC94 2353 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 A0A1B0GUS0 222 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 CRIP1P50238 77 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 TCL1AP56279 114 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 FOXL1Q12952 345 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 PSMG4Q5JS54 123 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 NDUFA11Q86Y39 141 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 NDFIP1Q9BT67 221 aa11.6□□□□□ -0.55
CTNNA1-236ENST00000522792 P01737 135 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 ZNF138P52744 262 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 C9orf47Q6ZRZ4 202 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 TMEM61Q8N0U2 210 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 OR10J6PQ8NGY7 276 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 RPP21Q9H633 154 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-236ENST00000522792 TRBV24-1A0A075B6N3 115 aa11.58□□□□□ -0.56
CTNNA1-236ENST00000522792 RPS10P46783 165 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-236ENST00000522792 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-236ENST00000522792 PAFAH1B2P68402 229 aa11.58□□□□□ -0.56
CTNNA1-236ENST00000522792 DEFB114Q30KQ6 69 aa11.58□□□□□ -0.56
CTNNA1-236ENST00000522792 OR8A1Q8NGG7 326 aa11.58□□□□□ -0.56
CTNNA1-236ENST00000522792 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 CD300EQ496F6 205 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 C12orf57Q99622 126 aa11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 SPINK4O60575 86 aa11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 SH2D1AO60880 128 aa11.57□□□□□ -0.56
CTNNA1-236ENST00000522792 CD33P20138 364 aa11.56□□□□□ -0.56
CTNNA1-236ENST00000522792 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
CTNNA1-236ENST00000522792 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
CTNNA1-236ENST00000522792 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 J3KRW8 73 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 GZMBP10144 247 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 AKR1D1P51857 326 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 FAM162BQ5T6X4 162 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 COX8CQ7Z4L0 72 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 NIPBLQ6KC79 2804 aaeCLIP11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 SAP30O75446 220 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 PF4P02776 101 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 ZFP82Q8N141 532 aa11.55□□□□□ -0.56
CTNNA1-236ENST00000522792 TSKUQ8WUA8 353 aa11.54□□□□□ -0.56
CTNNA1-236ENST00000522792 NEU1Q99519 415 aa11.54□□□□□ -0.56
CTNNA1-236ENST00000522792 TMSB15BA0A087X1C1 80 aa11.53□□□□□ -0.56
CTNNA1-236ENST00000522792 PRR9Q5T870 116 aa11.53□□□□□ -0.56
CTNNA1-236ENST00000522792 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
CTNNA1-236ENST00000522792 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms