RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SCGB1D2O95969 90 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 HOXB5P09067 269 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 PRB4P10163 310 aaPredicted RBP4.26□□□□□ -1.73
PABPC1-220ENST00000522658 FUSP35637 526 aaKnown RBP eCLIP4.26□□□□□ -1.73
PABPC1-220ENST00000522658 RAB31Q13636 194 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 TMEM128Q5BJH2 165 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 NEGR1Q7Z3B1 354 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 LINC00305Q7Z4B0 112 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 OR10P1Q8NGE3 313 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 MCFD2Q8NI22 146 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 TXNDC17Q9BRA2 123 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 LINC00467Q9BRT7 94 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 GSN-AS1Q9NRJ2 163 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 CCDC59Q9P031 241 aaKnown RBP4.26□□□□□ -1.73
PABPC1-220ENST00000522658 MDFICQ9P1T7 246 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 PRO0255Q9UI72 69 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 ANKRD20A5PA0PJZ0 165 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 C7orf71A4D174 169 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 AGPAT2O15120 278 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 CTDSPLO15194 276 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 SLC25A5P05141 298 aaKnown RBP4.25□□□□□ -1.73
PABPC1-220ENST00000522658 CRYGDP07320 174 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 SNRPCP09234 159 aaKnown RBP4.25□□□□□ -1.73
PABPC1-220ENST00000522658 INPP1P49441 399 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 PPT1P50897 306 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 HAMPP81172 84 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 SLC38A11Q08AI6 406 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 ZNF415Q09FC8 603 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 DAZ2Q13117 558 aaKnown RBP4.25□□□□□ -1.73
PABPC1-220ENST00000522658 GUK1Q16774 197 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 C10orf113Q5VZT2 155 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 Q6ZRG5 221 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 TOMM5Q8N4H5 51 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 EIF4E3Q8N5X7 224 aaKnown RBP4.25□□□□□ -1.73
PABPC1-220ENST00000522658 LINC00612Q8N6U2 182 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 OR1L4Q8NGR5 311 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 ODF3Q96PU9 254 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 TMEM70Q9BUB7 260 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 PARD6GQ9BYG4 376 aaPredicted RBP4.25□□□□□ -1.73
PABPC1-220ENST00000522658 NPVFQ9HCQ7 196 aa4.25□□□□□ -1.73
PABPC1-220ENST00000522658 ZNF331Q9NQX6 463 aaPredicted RBP4.25□□□□□ -1.73
PABPC1-220ENST00000522658 C9JCJ5 164 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 E5RGE8 158 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 H0YIZ8 118 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 H3BTX0 84 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 L7N2F9 121 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 MPDU1O75352 247 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-220ENST00000522658 ORM1P02763 201 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 GPX1P07203 203 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 OR4E1P0C645 316 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 HIST1H1EP10412 219 aaKnown RBP4.24□□□□□ -1.73
PABPC1-220ENST00000522658 XGP55808 180 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 TCL1AP56279 114 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 PLP1P60201 277 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 VAMP2P63027 116 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 TMEM78Q5T7P6 136 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-220ENST00000522658 C12orf45Q8N5I9 185 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-220ENST00000522658 NHLRC2Q8NBF2 726 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 ST6GAL2Q96JF0 529 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 PFDN5Q99471 154 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 VGLL1Q99990 258 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 AAMDCQ9H7C9 122 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 MRPL16Q9NX20 251 aaKnown RBP4.24□□□□□ -1.73
PABPC1-220ENST00000522658 TIMM9Q9Y5J7 89 aa4.24□□□□□ -1.73
PABPC1-220ENST00000522658 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
PABPC1-220ENST00000522658 DNAH5Q8TE73 4624 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 FABP12A6NFH5 140 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 PRSS46E5RG02 174 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 FNDC10F2Z333 226 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 PITX3O75364 302 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 SFT2D2O95562 160 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 METTL15P1P0C7V9 234 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 POLR2GP62487 172 aaKnown RBP eCLIP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 BTN1A1Q13410 526 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 PYDC2Q56P42 97 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 IBA57Q5T440 356 aaKnown RBP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 SH2D6Q7Z4S9 175 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 LRTM2Q8N967 370 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 ZNF431Q8TF32 576 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 DEFB104AQ8WTQ1 72 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 MRPL53Q96EL3 112 aaKnown RBP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 VSIG2Q96IQ7 327 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 SLC25A21Q9BQT8 299 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-220ENST00000522658 SRRQ9GZT4 340 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 Q9HAA7 133 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 HHLA3Q9XRX5 114 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 PRELID1Q9Y255 219 aa4.23□□□□□ -1.73
PABPC1-220ENST00000522658 TRAV8-6A0A0B4J262 113 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 SLC17A3O00476 420 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 CTDSP2O14595 271 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 PRAF2O60831 178 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 CT45A10P0DMU9 189 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 MALP21145 153 aa4.22□□□□□ -1.73
PABPC1-220ENST00000522658 CAMLGP49069 296 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms