RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 STX12Q86Y82 276 aa4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 ZNF738Q8NE65 137 aa4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 C16orf74Q96GX8 76 aa4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 SLC25A21Q9BQT8 299 aaPredicted RBP4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 OR51M1Q9H341 326 aa4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 STRAPQ9Y3F4 350 aaKnown RBP4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 TIMM8BQ9Y5J9 83 aaPredicted RBP4.79□□□□□ -1.64
SH2D4A-205ENST00000522328 A0A087X0K7 114 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 TRAV8-2A0A0B4J237 113 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 PLAC8L1A1L4L8 177 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 H3BRN7 92 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 HYPMO75409 117 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 ADAP1O75689 374 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 NUDT3O95989 172 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 CXCL2P19875 107 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 BTCP35070 178 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 PLP1P60201 277 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 RHOBP62745 196 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 CLINT1Q14677 625 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 SPANXN5Q5MJ07 72 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 ACOT7LQ6ZUV0 252 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 TMED4Q7Z7H5 227 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 BAP18Q8IXM2 172 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 SVBPQ8N300 66 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 TOMM5Q8N4H5 51 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 C12orf45Q8N5I9 185 aaPredicted RBP4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 OR8A1Q8NGG7 326 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 OR2T35Q8NGX2 323 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 OR10J6PQ8NGY7 276 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 DAZAP1Q96EP5 407 aaKnown RBP4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 LINC01587Q99440 93 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 C20orf144Q9BQM9 153 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 SHANK2-AS3Q9BTD1 123 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 KRTAP4-5Q9BYR2 181 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 SLC25A39Q9BZJ4 359 aaPredicted RBP4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 GPN1Q9HCN4 374 aaPredicted RBP4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 HIGD1AQ9Y241 93 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 LRP1BQ9NZR2 4599 aa4.78□□□□□ -1.64
SH2D4A-205ENST00000522328 A0A1W2PPQ1 181 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 FNDC10F2Z333 226 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 G3V3Q6 166 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 H7BYZ3 331 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 SSNA1O43805 119 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 SFT2D2O95562 160 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 LINC00869P0C866 280 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 CXCL3P19876 107 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 GATA2P23769 480 aaPredicted RBP4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 CDKN1BP46527 198 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 UBE2MP61081 183 aaKnown RBP4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 PSG3Q16557 428 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 C10orf91Q5T1B1 145 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 IGFL4Q6B9Z1 124 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 CYP2G1PQ6ZSU1 146 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 RNF182Q8N6D2 247 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 RNASE8Q8TDE3 154 aaKnown RBP4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 TMEM263Q8WUH6 116 aaKnown RBP4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 PHYHIPLQ96FC7 376 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 NUDT15Q9NV35 164 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
SH2D4A-205ENST00000522328 TRAV12-2A0A075B6T6 113 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 TRAV6A0A075B6T7 132 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 A0A0D9SG52 128 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 SMCO3A2RU48 225 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 LINC00587B1AMM8 73 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 H3BNG1 76 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 H3BP45 60 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 K7EPK0 472 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 APOC3P02656 99 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 RLN2P04090 185 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 HOXB5P09067 269 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 OR5G3P0C626 314 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 AZU1P20160 251 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 PVALBP20472 110 aaPredicted RBP4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 RAB4BP61018 213 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 DLK1P80370 383 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 PPP1R1AQ13522 171 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 DNLZQ5SXM8 178 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 LCN15Q6UWW0 184 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 TMEM182Q6ZP80 229 aaPredicted RBP4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 TMUB2Q71RG4 321 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 SSX7Q7RTT5 188 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 Q8N1X5 172 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 RXFP4Q8TDU9 374 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 RPUSD4Q96CM3 377 aaKnown RBP4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 GNPNAT1Q96EK6 184 aaPredicted RBP4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 SLC50A1Q9BRV3 221 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 Q9H3A6 140 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 Q9H8V8 135 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 NPVFQ9HCQ7 196 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 GSN-AS1Q9NRJ2 163 aa4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 CARHSP1Q9Y2V2 147 aaKnown RBP4.76□□□□□ -1.65
SH2D4A-205ENST00000522328 FAM74A7A6NL05 159 aa4.75□□□□□ -1.65
SH2D4A-205ENST00000522328 PRM2P04554 102 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms