RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SMIM12Q96EX1 92 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 LINC00052Q96N35 136 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 FAM110AQ9BQ89 295 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 DERL1Q9BUN8 251 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 PRAC2D3DTV9 90 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 NPIPB6E9PJ23 425 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 ZNF674Q2M3X9 581 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 BEAN1Q3B7T3 259 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 IGF2BP2-AS1Q96M15 143 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 NIPSNAP3BQ9BS92 247 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 MAP6D1Q9H9H5 199 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 TRRAPQ9Y4A5 3859 aa9.74□□□□□ -0.85
CPNE3-205ENST00000522240 TRBV20OR9-2A0A075B6H5 130 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 IGLV2-11P01706 119 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 FLI1Q01543 452 aaPredicted RBP9.73□□□□□ -0.85
CPNE3-205ENST00000522240 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 FOXI2Q6ZQN5 318 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 C9orf47Q6ZRZ4 202 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 OR8A1Q8NGG7 326 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 PPP1R14DQ9NXH3 145 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 NAT8Q9UHE5 227 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 VWFP04275 2813 aa9.73□□□□□ -0.85
CPNE3-205ENST00000522240 TRAV8-1A0A0A6YYK1 113 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 TRAV34A0A0B4J273 112 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 A0A0J9YX75 114 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 LTAP01374 205 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 IGLL1P15814 213 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 S100A1P23297 94 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 GNG4P50150 75 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 DEFB131AP59861 70 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
CPNE3-205ENST00000522240 TMEM78Q5T7P6 136 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 LINC00477Q96M19 166 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 LINC00479Q96M42 142 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 SAV1Q9H4B6 383 aaPredicted RBP9.72□□□□□ -0.85
CPNE3-205ENST00000522240 PSG8Q9UQ74 426 aa9.72□□□□□ -0.85
CPNE3-205ENST00000522240 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 OR11H12B2RN74 326 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 DUSP14O95147 198 aaKnown RBP9.71□□□□□ -0.86
CPNE3-205ENST00000522240 ZNF138P52744 262 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 HIST1H1AQ02539 215 aaPredicted RBP9.71□□□□□ -0.86
CPNE3-205ENST00000522240 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 EBLN2Q6P2I7 272 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 ODF3Q96PU9 254 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 VGLL1Q99990 258 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 NDFIP1Q9BT67 221 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 SDF2L1Q9HCN8 221 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 ZFP30Q9Y2G7 519 aa9.71□□□□□ -0.86
CPNE3-205ENST00000522240 A8MTW9 85 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 HLA-DRB4P13762 266 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 SAPCD1Q5SSQ6 148 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 BAGE2Q86Y30 109 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 TVP23CQ96ET8 276 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 MLST8Q9BVC4 326 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 HLA-DRB4X5D2U9 266 aa9.7□□□□□ -0.86
CPNE3-205ENST00000522240 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 F6UB75 175 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 RPL23P62829 140 aaKnown RBP9.69□□□□□ -0.86
CPNE3-205ENST00000522240 ERCC8Q13216 396 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 GTSCR1Q86UQ5 136 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 SVBPQ8N300 66 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 Q8TAT8 98 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 SGK494Q96LW2 274 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 CLUHP3Q96NS8 147 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 PRR25Q96S07 402 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
CPNE3-205ENST00000522240 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
CPNE3-205ENST00000522240 APOC3P02656 99 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 CD7P09564 240 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 PRB4P10163 310 aaPredicted RBP9.68□□□□□ -0.86
CPNE3-205ENST00000522240 DEFB1P60022 68 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
CPNE3-205ENST00000522240 GDF5OSQ5U4N7 250 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 FAM19A4Q96LR4 140 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 C19orf73Q9NVV2 129 aa9.68□□□□□ -0.86
CPNE3-205ENST00000522240 PGPEP1LA6NFU8 196 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 H3BMM0 161 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 ZNF705DP0CH99 300 aaPredicted RBP9.67□□□□□ -0.86
CPNE3-205ENST00000522240 ZNF705BP0CI00 300 aaPredicted RBP9.67□□□□□ -0.86
CPNE3-205ENST00000522240 CT45A10P0DMU9 189 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 CRISP2P16562 243 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 EGFEM1PQ0D2K5 195 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 ADIRFQ15847 76 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 OCC1Q8TAD7 63 aa9.67□□□□□ -0.86
CPNE3-205ENST00000522240 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 B4DEV8 164 aa9.66□□□□□ -0.86
CPNE3-205ENST00000522240 K7EN84 100 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms