RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 FHITP49789 147 aa6.78□□□□□ -1.32
CLK4-209ENST00000521621 ZNF138P52744 262 aa6.78□□□□□ -1.32
CLK4-209ENST00000521621 ICAM4Q14773 271 aa6.78□□□□□ -1.32
CLK4-209ENST00000521621 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
CLK4-209ENST00000521621 HSD17B11Q8NBQ5 300 aa6.78□□□□□ -1.32
CLK4-209ENST00000521621 DKK2Q9UBU2 259 aa6.78□□□□□ -1.32
CLK4-209ENST00000521621 PLAC8L1A1L4L8 177 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 C1QBP02746 253 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 FAM122CQ6P4D5 195 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 OR11H4Q8NGC9 324 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 TMEM263Q8WUH6 116 aaKnown RBP6.77□□□□□ -1.33
CLK4-209ENST00000521621 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 LOC102723971A0A1B0GUV8 181 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
CLK4-209ENST00000521621 GCHFRP30047 84 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 TMEM78Q5T7P6 136 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 Q6AWC8 147 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 EXOC3-AS1Q8N2X6 119 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 PHLDA1Q8WV24 401 aaPredicted RBP6.77□□□□□ -1.33
CLK4-209ENST00000521621 MBD3L1Q8WWY6 194 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
CLK4-209ENST00000521621 C7orf71A4D174 169 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 IGKV3-20P01619 116 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 C12orf74Q32Q52 190 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 GFI1BQ5VTD9 330 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 ZFAND2AQ8N6M9 145 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 C5orf17Q8NAS9 161 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 ZNF680Q8NEM1 530 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 RNASE8Q8TDE3 154 aaKnown RBP6.76□□□□□ -1.33
CLK4-209ENST00000521621 BLNKQ8WV28 456 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 SH3BGRL3Q9H299 93 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 M0R2Z0 102 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 M0R3E3 92 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 OR10J4P0C629 311 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 ARL14EPLP0DKL9 152 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 DAZ2Q13117 558 aaKnown RBP6.76□□□□□ -1.33
CLK4-209ENST00000521621 IBA57Q5T440 356 aaKnown RBP6.76□□□□□ -1.33
CLK4-209ENST00000521621 COX8CQ7Z4L0 72 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 C2CD4CQ8TF44 421 aa6.76□□□□□ -1.33
CLK4-209ENST00000521621 KANTRA0A1W2PQU2 76 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 RAB5CP51148 216 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 PMS2P11Q13670 270 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 ZNF726P1Q15940 193 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 AKR1C8PQ5T2L2 129 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 AGRNO00468 2067 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 H3BTX0 84 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 PPT1P50897 306 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 FXYD7P58549 80 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 TMUB2Q71RG4 321 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 NIPSNAP3BQ9BS92 247 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 CSMD3Q7Z407 3707 aa6.75□□□□□ -1.33
CLK4-209ENST00000521621 TRAV1-1A0A0B4J248 108 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 NANOS2P60321 138 aaKnown RBP6.74□□□□□ -1.33
CLK4-209ENST00000521621 RANP62826 216 aaKnown RBP6.74□□□□□ -1.33
CLK4-209ENST00000521621 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 BAP18Q8IXM2 172 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 TPT1P13693 172 aaKnown RBP6.74□□□□□ -1.33
CLK4-209ENST00000521621 LGALS9CQ6DKI2 356 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 EIF5AL1Q6IS14 154 aaKnown RBP6.74□□□□□ -1.33
CLK4-209ENST00000521621 CMTM2Q8TAZ6 248 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 LINC01587Q99440 93 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 VGLL1Q99990 258 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 PGPA6NDG6 321 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 CCDC28AQ8IWP9 274 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
CLK4-209ENST00000521621 TMEM208Q9BTX3 173 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 APLNQ9ULZ1 77 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 CELA1Q9UNI1 258 aa6.74□□□□□ -1.33
CLK4-209ENST00000521621 YTHDF2Q9Y5A9 579 aaKnown RBP6.74□□□□□ -1.33
CLK4-209ENST00000521621 STARD9Q9P2P6 4700 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 LYSTQ99698 3801 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 CBY3A6NI87 242 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 SMLR1H3BR10 107 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 K7EQM0 130 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 TCRAP04437 139 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 HIST1H2BAQ96A08 127 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 PTH2Q96A98 100 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 EPDR1Q9UM22 224 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
CLK4-209ENST00000521621 H3BNG1 76 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
CLK4-209ENST00000521621 ERCC8Q13216 396 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 LGALS9BQ3B8N2 356 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 FAM222AQ5U5X8 452 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 ATG101Q9BSB4 218 aa6.73□□□□□ -1.33
CLK4-209ENST00000521621 TIMM8BQ9Y5J9 83 aaPredicted RBP6.73□□□□□ -1.33
CLK4-209ENST00000521621 TRAV12-2A0A075B6T6 113 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 AKAP14Q86UN6 197 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 LINC00476Q8WZB0 136 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 TXNDC17Q9BRA2 123 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 FAM74A7A6NL05 159 aa6.72□□□□□ -1.33
CLK4-209ENST00000521621 ZNF705GA8MUZ8 300 aaPredicted RBP6.72□□□□□ -1.33
CLK4-209ENST00000521621 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms