RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 MANBALQ9NQG1 85 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
TRAM1-203ENST00000520700 FBLL1A6NHQ2 334 aaKnown RBP12.71□□□□□ -0.37
TRAM1-203ENST00000520700 PAGE4O60829 102 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
TRAM1-203ENST00000520700 IGKV3-20P01619 116 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 TSPOP30536 169 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 TAGLN2P37802 199 aaKnown RBP12.71□□□□□ -0.37
TRAM1-203ENST00000520700 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 VGLL1Q99990 258 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 ZMAT4Q9H898 229 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 ZNF492Q9P255 531 aa12.71□□□□□ -0.37
TRAM1-203ENST00000520700 HUWE1Q7Z6Z7 4374 aaKnown RBP12.7□□□□□ -0.38
TRAM1-203ENST00000520700 A0A1B0GV50 99 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 K7EQM0 130 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 CRISP2P16562 243 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 ZNF138P52744 262 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 ERCC8Q13216 396 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 NBEAL2Q6ZNJ1 2754 aa12.7□□□□□ -0.38
TRAM1-203ENST00000520700 F6UZH7 168 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
TRAM1-203ENST00000520700 SPRY2O43597 315 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 IFNA1P01562 189 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 LEPP41159 167 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 CDKN1BP46527 198 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 IGF2BP2-AS1Q96M15 143 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 RCHY1Q96PM5 261 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 XCL2Q9UBD3 114 aa12.69□□□□□ -0.38
TRAM1-203ENST00000520700 GNG5P63218 68 aa12.68□□□□□ -0.38
TRAM1-203ENST00000520700 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
TRAM1-203ENST00000520700 GNG13Q9P2W3 67 aa12.68□□□□□ -0.38
TRAM1-203ENST00000520700 KLF12Q9Y4X4 402 aa12.68□□□□□ -0.38
TRAM1-203ENST00000520700 KLLNB2CW77 178 aa12.67□□□□□ -0.38
TRAM1-203ENST00000520700 PEX7O00628 323 aa12.67□□□□□ -0.38
TRAM1-203ENST00000520700 PRB4P10163 310 aaPredicted RBP12.67□□□□□ -0.38
TRAM1-203ENST00000520700 ATP5G3P48201 142 aa12.67□□□□□ -0.38
TRAM1-203ENST00000520700 SPINK13Q1W4C9 94 aa12.67□□□□□ -0.38
TRAM1-203ENST00000520700 DEFB135Q30KP9 77 aa12.67□□□□□ -0.38
TRAM1-203ENST00000520700 ZNF705AQ6ZN79 300 aaPredicted RBP12.67□□□□□ -0.38
TRAM1-203ENST00000520700 TMEM75Q8N9X5 138 aa12.67□□□□□ -0.38
TRAM1-203ENST00000520700 TRBV6-1A0A0K0K1D8 114 aa12.66□□□□□ -0.38
TRAM1-203ENST00000520700 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
TRAM1-203ENST00000520700 M0R2Z0 102 aa12.66□□□□□ -0.38
TRAM1-203ENST00000520700 IGLV2-11P01706 119 aa12.66□□□□□ -0.38
TRAM1-203ENST00000520700 NEU1Q99519 415 aa12.66□□□□□ -0.38
TRAM1-203ENST00000520700 VAX2Q9UIW0 290 aa12.66□□□□□ -0.38
TRAM1-203ENST00000520700 NDUFS6O75380 124 aaKnown RBP12.65□□□□□ -0.38
TRAM1-203ENST00000520700 S100A9P06702 114 aaKnown RBP12.65□□□□□ -0.38
TRAM1-203ENST00000520700 BCL2P10415 239 aa12.65□□□□□ -0.38
TRAM1-203ENST00000520700 FXYD7P58549 80 aa12.65□□□□□ -0.38
TRAM1-203ENST00000520700 ZNF767PQ75MW2 155 aa12.65□□□□□ -0.38
TRAM1-203ENST00000520700 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
TRAM1-203ENST00000520700 ZFAND2AQ8N6M9 145 aa12.65□□□□□ -0.38
TRAM1-203ENST00000520700 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
TRAM1-203ENST00000520700 COL7A1Q02388 2944 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 INSP01308 110 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 FLI1Q01543 452 aaPredicted RBP12.64□□□□□ -0.39
TRAM1-203ENST00000520700 MEF2BQ02080 365 aaPredicted RBP12.64□□□□□ -0.39
TRAM1-203ENST00000520700 TMEM256Q8N2U0 113 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 C2CD4CQ8TF44 421 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 C11orf52Q96A22 123 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 RARRES2Q99969 163 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 PSG8Q9UQ74 426 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 GOLT1BQ9Y3E0 138 aa12.64□□□□□ -0.39
TRAM1-203ENST00000520700 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 SMIM9A6NGZ8 99 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 PDE6DO43924 150 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 IFITM2Q01629 132 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 SAPCD1Q5SSQ6 148 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 OR11H2Q8NH07 326 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 FMC1Q96HJ9 113 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 RETNQ9HD89 108 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 U3KQK5 164 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 X6R8D5 127 aa12.63□□□□□ -0.39
TRAM1-203ENST00000520700 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 RBFOX3A6NFN3 312 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
TRAM1-203ENST00000520700 GPX1P07203 203 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 KIR3DS1Q14943 382 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 GFI1BQ5VTD9 330 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 COX8CQ7Z4L0 72 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 Q8TAT8 98 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 TVP23CQ96ET8 276 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 LINC00479Q96M42 142 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 ZFP30Q9Y2G7 519 aa12.62□□□□□ -0.39
TRAM1-203ENST00000520700 C7orf71A4D174 169 aa12.61□□□□□ -0.39
TRAM1-203ENST00000520700 MIFP14174 115 aa12.61□□□□□ -0.39
TRAM1-203ENST00000520700 FAM210AQ96ND0 272 aa12.61□□□□□ -0.39
TRAM1-203ENST00000520700 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
TRAM1-203ENST00000520700 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
TRAM1-203ENST00000520700 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms