RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, human

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-208	ENST00000518668	FGF23	Q9GZV9	251 aa	Predicted RBP	11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	FER1L5	A0AVI2	2057 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668		A0A087WWL8	130 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	ESD	P10768	282 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668		A0A087X0K7	114 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	IGHV7-4-1	A0A0J9YVY3	117 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668		I3L3M4	83 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	CDKN1B	P46527	198 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	LGALS9B	Q3B8N2	356 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	LGALS9C	Q6DKI2	356 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	CTSZ	Q9UBR2	303 aa		11.22	□□□□□ -0.61
DENND3-208	ENST00000518668	IGHV3-64	A0A075B6Q5	118 aa		11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	PRB4	P10163	310 aa	Predicted RBP	11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	MRPL51	Q4U2R6	128 aa	Known RBP	11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	S100A7L2	Q5SY68	101 aa		11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	SIGMAR1	Q99720	223 aa		11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	C2orf66	Q6UXQ4	117 aa		11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	NPB	Q8NG41	125 aa		11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	PGPEP1	Q9NXJ5	209 aa		11.21	□□□□□ -0.61
DENND3-208	ENST00000518668	RPL35A	P18077	110 aa	Known RBP	11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	FXYD7	P58549	80 aa		11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	DKK4	Q9UBT3	224 aa		11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	C22orf46	C9J442	243 aa		11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	HOXB4	P17483	251 aa	Predicted RBP	11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	UBE2V1	Q13404	147 aa		11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	KIR3DS1	Q14943	382 aa		11.21	□□□□□ -0.62
DENND3-208	ENST00000518668	SS18	Q15532	418 aa		11.21	□□□□□ -0.62
DENND3-208	ENST00000518668		K7EMI3	77 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	C20orf78	Q9BR46	151 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	LEPROT	O15243	131 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	TDGF1P3	P51864	188 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	DIAPH2-AS1	Q14236	149 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	PMVK	Q15126	192 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	C1orf159	Q96HA4	380 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	ATP6V0B	Q99437	205 aa		11.2	□□□□□ -0.62
DENND3-208	ENST00000518668	SPTBN2	O15020	2390 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	SPTBN1	Q01082	2364 aa	Known RBP	11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	SLA	Q13239	276 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	ZC2HC1A	Q96GY0	325 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	UBE2E2	Q96LR5	201 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	SPX	Q9BT56	116 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	TP53TG1	Q9Y2A0	90 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	INS-IGF2	F8WCM5	200 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	CR1L	Q2VPA4	569 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	WT1	P19544	449 aa	Predicted RBP	11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	SFTA2	Q6UW10	78 aa		11.19	□□□□□ -0.62
DENND3-208	ENST00000518668	C6orf226	Q5I0X4	101 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	ZNF124	Q15973	351 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	TCTEX1D4	Q5JR98	221 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	PAX4	O43316	350 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	IGFBPL1	Q8WX77	278 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668		Q96MF0	132 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	JPT2	Q9H910	190 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	ANXA2R	Q3ZCQ2	193 aa		11.18	□□□□□ -0.62
DENND3-208	ENST00000518668	IGHV3-53	P01767	116 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	SPINK13	Q1W4C9	94 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	PRR31	Q5SQ13	230 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	SELENOK	Q9Y6D0	94 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	IGHV1-24	A0A0C4DH33	117 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	KLF5	Q13887	457 aa	Predicted RBP	11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	SMIM2	Q9BVW6	85 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	ROS1	P08922	2347 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	TMEM95	Q3KNT9	176 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	BOD1L2	Q8IYS8	172 aa		11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	MCRIP2	Q9BUT9	160 aa	Known RBP	11.17	□□□□□ -0.62
DENND3-208	ENST00000518668	PRIMA1	Q86XR5	153 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	YLPM1	P49750	1951 aa	Known RBP	11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	SDHAF1	A6NFY7	115 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	LGALS1	P09382	135 aa	Known RBP	11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	IGLC2	P0DOY2	106 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	IGLC3	P0DOY3	106 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	COX11	Q9Y6N1	276 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668		Q6ZWC4	215 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	SIGLEC8	Q9NYZ4	499 aa		11.16	□□□□□ -0.62
DENND3-208	ENST00000518668	AKAP6	Q13023	2319 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	TRBV25-1	A0A075B6N4	114 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	TCF15	Q12870	199 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	PRSS57	Q6UWY2	283 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	DOCK9	Q9BZ29	2069 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668		A0A0U1RRA0	63 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	TAL2	Q16559	108 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	FOXI2	Q6ZQN5	318 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	CENPVL3	A0A0U1RRI6	287 aa		11.15	□□□□□ -0.62
DENND3-208	ENST00000518668	COX8A	P10176	69 aa		11.15	□□□□□ -0.63
DENND3-208	ENST00000518668	CST9L	Q9H4G1	147 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	VPREB3	Q9UKI3	123 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	TRAV13-1	A0A0B4J241	112 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668		K7EN84	100 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	COA6	Q5JTJ3	125 aa	Known RBP	11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	FAM120AOS	Q5T036	256 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	STPG4	Q8N801	248 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	COL4A3	Q01955	1670 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	HLA-DRB4	P13762	266 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	LURAP1L	Q8IV03	231 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	DNAJC30	Q96LL9	226 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	HLA-DRB4	X5D2U9	266 aa		11.14	□□□□□ -0.63
DENND3-208	ENST00000518668	PKDREJ	Q9NTG1	2253 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms