RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
PDGFRB-202ENST00000517488 ACOT6Q3I5F7 207 aaPredicted RBP9.97□□□□□ -0.81
PDGFRB-202ENST00000517488 KHDC3LQ587J8 217 aa9.97□□□□□ -0.81
PDGFRB-202ENST00000517488 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
PDGFRB-202ENST00000517488 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
PDGFRB-202ENST00000517488 KLLNB2CW77 178 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 TAS2R45P59539 299 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 CD300CQ08708 224 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 TMEM263Q8WUH6 116 aaKnown RBP9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 ASB13Q8WXK3 278 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 FAM210BQ96KR6 192 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 Q9H3A6 140 aa9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 TIMM8BQ9Y5J9 83 aaPredicted RBP9.96□□□□□ -0.82
PDGFRB-202ENST00000517488 DNAH17Q9UFH2 4485 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 C7orf71A4D174 169 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 CRISP2P16562 243 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 RNASE4P34096 147 aaKnown RBP9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 BTN1A1Q13410 526 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 ZNF266Q14584 549 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 TMEM88Q6PEY1 159 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 CCDC28AQ8IWP9 274 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 OR10G9Q8NGN4 311 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 OR10G7Q8NGN6 311 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 OR2T35Q8NGX2 323 aa9.95□□□□□ -0.82
PDGFRB-202ENST00000517488 FAT2Q9NYQ8 4349 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 FXYD6-FXYD2A0A087WZ82 144 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 A0A1W2PPV4 95 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 RNF222A6NCQ9 220 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 G3V3Q6 166 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 ATP6V0CP27449 155 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 PRR9Q5T870 116 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 OR2G3Q8NGZ4 309 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 Q8TAT8 98 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 PYGO2Q9BRQ0 406 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 ZNF492Q9P255 531 aa9.94□□□□□ -0.82
PDGFRB-202ENST00000517488 CBY3A6NI87 242 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 GPX1P07203 203 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 P0DMU3 169 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 FAM231AP0DMU4 169 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 FAM231CP0DMU5 169 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 CSN1S1P47710 185 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 ZNF138P52744 262 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 PQLC2Q6ZP29 291 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 Q6ZQT7 251 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 INO80EQ8NBZ0 244 aaPredicted RBP9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 HYLS1Q96M11 299 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 SH3BGRL3Q9H299 93 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 TNFSF18Q9UNG2 199 aa9.93□□□□□ -0.82
PDGFRB-202ENST00000517488 PGPA6NDG6 321 aa9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 F5H768 121 aa9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 NMBP08949 121 aa9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 CDC34P49427 236 aaPredicted RBP9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 RPL7L1Q6DKI1 246 aaKnown RBP9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 POM121L12Q8N7R1 296 aa9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 PSMG3Q9BT73 122 aaPredicted RBP9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 OTORQ9NRC9 128 aa9.92□□□□□ -0.82
PDGFRB-202ENST00000517488 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 ATP5G1P05496 136 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 ARL14EPLP0DKL9 152 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 ATP5G3P48201 142 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 RXFP4Q8TDU9 374 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 RAB24Q969Q5 203 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
PDGFRB-202ENST00000517488 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 SNURFLB1AK76 121 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 SMLR1H3BR10 107 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 GAGE7O76087 117 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 STAG3L2P0CL84 134 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 STAG3L3P0CL85 134 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 SERF2P84101 59 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 C11orf72Q8NBR9 251 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 GSN-AS1Q9NRJ2 163 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 TP53TG3Q9ULZ0 132 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
PDGFRB-202ENST00000517488 MBP02144 154 aa9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 DAZ2Q13117 558 aaKnown RBP9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 ANXA2RQ3ZCQ2 193 aa9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 Q6ZTI0 123 aa9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 EIF4E3Q8N5X7 224 aaKnown RBP9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 CMTM2Q8TAZ6 248 aa9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 HECTD4Q9Y4D8 3996 aa9.89□□□□□ -0.83
PDGFRB-202ENST00000517488 IGHV1OR15-1A0A075B7D0 117 aa9.88□□□□□ -0.83
PDGFRB-202ENST00000517488 BORCS7-ASMTA0A0B4J1R7 106 aa9.88□□□□□ -0.83
PDGFRB-202ENST00000517488 RGS13O14921 159 aa9.88□□□□□ -0.83
PDGFRB-202ENST00000517488 GCHFRP30047 84 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms