RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MBP02144 154 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 PRB4P10163 310 aaPredicted RBP9.1□□□□□ -0.95
CLCN3-210ENST00000515420 CRISP2P16562 243 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 DAD1P61803 113 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 ZNF767PQ75MW2 155 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 HSD17B11Q8NBQ5 300 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
CLCN3-210ENST00000515420 BORCS7-ASMTA0A0B4J1R7 106 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 ATP6V0CP27449 155 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 CSN1S1P47710 185 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 RAB2AP61019 212 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 KIR3DS1Q14943 382 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 OR10G4Q8NGN3 311 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 OR10G9Q8NGN4 311 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 OR10G7Q8NGN6 311 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 RXFP4Q8TDU9 374 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-210ENST00000515420 PYGO2Q9BRQ0 406 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 Q9H3A6 140 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-210ENST00000515420 HYDINQ4G0P3 5121 aa9.09□□□□□ -0.95
CLCN3-210ENST00000515420 C7orf71A4D174 169 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 G3V3Q6 166 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 AZU1P20160 251 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 CDC34P49427 236 aaPredicted RBP9.08□□□□□ -0.96
CLCN3-210ENST00000515420 RANP62826 216 aaKnown RBP9.08□□□□□ -0.96
CLCN3-210ENST00000515420 ERCC8Q13216 396 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 FAM74A1Q5RGS3 127 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 CCDC28AQ8IWP9 274 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 LINC00467Q9BRT7 94 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 OTORQ9NRC9 128 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 ZNF492Q9P255 531 aa9.08□□□□□ -0.96
CLCN3-210ENST00000515420 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-210ENST00000515420 TRAV12-3A0A0B4J271 114 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 TAAR5O14804 337 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-210ENST00000515420 PRM2P04554 102 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 ZNF138P52744 262 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 TMED6Q8WW62 240 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 LENEPQ9Y5L5 61 aa9.07□□□□□ -0.96
CLCN3-210ENST00000515420 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-210ENST00000515420 GPX1P07203 203 aa9.06□□□□□ -0.96
CLCN3-210ENST00000515420 HTN1P15515 57 aa9.06□□□□□ -0.96
CLCN3-210ENST00000515420 RPL7L1Q6DKI1 246 aaKnown RBP9.06□□□□□ -0.96
CLCN3-210ENST00000515420 ZFAND2AQ8N6M9 145 aa9.06□□□□□ -0.96
CLCN3-210ENST00000515420 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
CLCN3-210ENST00000515420 RAB24Q969Q5 203 aa9.06□□□□□ -0.96
CLCN3-210ENST00000515420 VGLL1Q99990 258 aa9.06□□□□□ -0.96
CLCN3-210ENST00000515420 CBY3A6NI87 242 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 DIRC3C9JPN6 131 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 J3KRW8 73 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 P0DMU3 169 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 ZNF345Q14585 488 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 ZNF680Q8NEM1 530 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 CMTM2Q8TAZ6 248 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 SH3BGRL3Q9H299 93 aa9.05□□□□□ -0.96
CLCN3-210ENST00000515420 SERTM2A0A1B0GWG4 89 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 PGPA6NDG6 321 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 SNURFLB1AK76 121 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 ARPC5O15511 151 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 CXorf1O96002 111 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 ATP5G1P05496 136 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 ATP5G3P48201 142 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 CD300CQ08708 224 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
CLCN3-210ENST00000515420 BTN1A1Q13410 526 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
CLCN3-210ENST00000515420 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 ACTR3CQ9C0K3 210 aaPredicted RBP9.04□□□□□ -0.96
CLCN3-210ENST00000515420 NOP10Q9NPE3 64 aaKnown RBP9.04□□□□□ -0.96
CLCN3-210ENST00000515420 TMEM167BQ9NRX6 74 aa9.04□□□□□ -0.96
CLCN3-210ENST00000515420 HMSDA8MTL9 139 aa9.03□□□□□ -0.96
CLCN3-210ENST00000515420 DEFB130BP0DP73 79 aa9.03□□□□□ -0.96
CLCN3-210ENST00000515420 DEFB130AP0DP74 79 aa9.03□□□□□ -0.96
CLCN3-210ENST00000515420 GCHFRP30047 84 aa9.03□□□□□ -0.96
CLCN3-210ENST00000515420 RNASE4P34096 147 aaKnown RBP9.03□□□□□ -0.96
CLCN3-210ENST00000515420 IBA57Q5T440 356 aaKnown RBP9.03□□□□□ -0.96
CLCN3-210ENST00000515420 ST6GAL2Q96JF0 529 aa9.03□□□□□ -0.96
CLCN3-210ENST00000515420 HMGB3O15347 200 aaKnown RBP9.02□□□□□ -0.97
CLCN3-210ENST00000515420 EIF3GO75821 320 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLCN3-210ENST00000515420 HTN3P15516 51 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 PRR9Q5T870 116 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 Q6AWC8 147 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 KCNRGQ8N5I3 272 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 Q8TAT8 98 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 HYLS1Q96M11 299 aa9.02□□□□□ -0.97
CLCN3-210ENST00000515420 KMT2AQ03164 3969 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms