RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TEX48A0A1B0GUV7 120 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 LYRM9A8MSI8 78 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 M0R2N4 97 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 ACOT6Q3I5F7 207 aaPredicted RBP8.11□□□□□ -1.11
VCAN-212ENST00000515397 RNASE8Q8TDE3 154 aaKnown RBP8.11□□□□□ -1.11
VCAN-212ENST00000515397 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 SH3BGRL3Q9H299 93 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 RPH3ALQ9UNE2 315 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 TIMM8BQ9Y5J9 83 aaPredicted RBP8.11□□□□□ -1.11
VCAN-212ENST00000515397 FRAS1Q86XX4 4008 aa8.11□□□□□ -1.11
VCAN-212ENST00000515397 A0A1W2PPV4 95 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GAGE12BA1L429 117 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 SMLR1H3BR10 107 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GAGE7O76087 117 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GPX1P07203 203 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GIPP09681 153 aaPredicted RBP8.1□□□□□ -1.11
VCAN-212ENST00000515397 GAGE12FP0CL80 117 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GAGE12GP0CL81 117 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GAGE12IP0CL82 117 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 M6PRP20645 277 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 OXA1LQ15070 435 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 RGS21Q2M5E4 152 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 TMEM78Q5T7P6 136 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 C9orf47Q6ZRZ4 202 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 OR10G4Q8NGN3 311 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 OR10G9Q8NGN4 311 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 OR10G7Q8NGN6 311 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 C16orf74Q96GX8 76 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 FAM19A4Q96LR4 140 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 AQP10Q96PS8 301 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 GSN-AS1Q9NRJ2 163 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 TP53TG3Q9ULZ0 132 aa8.1□□□□□ -1.11
VCAN-212ENST00000515397 IGLV2-18A0A075B6J9 118 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 C7orf71A4D174 169 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 PGPA6NDG6 321 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 ZNF324O75467 553 aaPredicted RBP8.09□□□□□ -1.11
VCAN-212ENST00000515397 SLC25A5P05141 298 aaKnown RBP8.09□□□□□ -1.11
VCAN-212ENST00000515397 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 KHDC3LQ587J8 217 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.11
VCAN-212ENST00000515397 ZFAND2AQ8N6M9 145 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 OR2T35Q8NGX2 323 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
VCAN-212ENST00000515397 ODF3Q96PU9 254 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
VCAN-212ENST00000515397 CBY3A6NI87 242 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 KLLNB2CW77 178 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 NUDT3O95989 172 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 CSN1S1P47710 185 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 ZNF138P52744 262 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 TAS2R45P59539 299 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 GNG5P63218 68 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 OR5I1Q13606 314 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 ZNF493Q6ZR52 646 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 Q6ZTI0 123 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 POM121L12Q8N7R1 296 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 INO80EQ8NBZ0 244 aaPredicted RBP8.08□□□□□ -1.12
VCAN-212ENST00000515397 SGK494Q96LW2 274 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 C20orf144Q9BQM9 153 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 KLF12Q9Y4X4 402 aa8.08□□□□□ -1.12
VCAN-212ENST00000515397 RNF222A6NCQ9 220 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 SNURFLB1AK76 121 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 G3V3Q6 166 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 ATP5G1P05496 136 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 ARL14EPLP0DKL9 152 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 P0DMU3 169 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 CRISP2P16562 243 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 ATP5G3P48201 142 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 MUC21Q5SSG8 566 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 GOLT1AQ6ZVE7 132 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 SSX7Q7RTT5 188 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 PYGO2Q9BRQ0 406 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 TNFSF18Q9UNG2 199 aa8.07□□□□□ -1.12
VCAN-212ENST00000515397 TRAV8-1A0A0A6YYK1 113 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 A0A0J9YY99 117 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 RGS13O14921 159 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 HOXA5P20719 270 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 CDC34P49427 236 aaPredicted RBP8.06□□□□□ -1.12
VCAN-212ENST00000515397 ZNF266Q14584 549 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 LYPD1Q8N2G4 141 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 C11orf72Q8NBR9 251 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 RAB24Q969Q5 203 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 FAM210BQ96KR6 192 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 DNAH6Q9C0G6 4158 aa8.06□□□□□ -1.12
VCAN-212ENST00000515397 TRGV1A0A0A0MS02 117 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 EIF4E3Q8N5X7 224 aaKnown RBP8.05□□□□□ -1.12
VCAN-212ENST00000515397 OR2G3Q8NGZ4 309 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 CMTM2Q8TAZ6 248 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 TMPRSS5Q9H3S3 457 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 OTORQ9NRC9 128 aa8.05□□□□□ -1.12
VCAN-212ENST00000515397 IGHV1OR15-1A0A075B7D0 117 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 TRAV26-1A0A087WT03 109 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 F6UZH7 168 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms