RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 OR2T35Q8NGX2 323 aa12.36□□□□□ -0.43
DDR1-277ENST00000515219 NDUFAF3Q9BU61 184 aa12.36□□□□□ -0.43
DDR1-277ENST00000515219 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
DDR1-277ENST00000515219 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 CSN1S1P47710 185 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 CCDC28AQ8IWP9 274 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 LYPD1Q8N2G4 141 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
DDR1-277ENST00000515219 VGLL1Q99990 258 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 Q9H3A6 140 aa12.35□□□□□ -0.43
DDR1-277ENST00000515219 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
DDR1-277ENST00000515219 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
DDR1-277ENST00000515219 PSMG3Q9BT73 122 aaPredicted RBP12.34□□□□□ -0.43
DDR1-277ENST00000515219 TIMM8BQ9Y5J9 83 aaPredicted RBP12.34□□□□□ -0.43
DDR1-277ENST00000515219 C7orf71A4D174 169 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
DDR1-277ENST00000515219 GPX1P07203 203 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 FAM19A4Q96LR4 140 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
DDR1-277ENST00000515219 TNFSF18Q9UNG2 199 aa12.33□□□□□ -0.44
DDR1-277ENST00000515219 KLLNB2CW77 178 aa12.32□□□□□ -0.44
DDR1-277ENST00000515219 RNASE4P34096 147 aaKnown RBP12.32□□□□□ -0.44
DDR1-277ENST00000515219 CDC34P49427 236 aaPredicted RBP12.32□□□□□ -0.44
DDR1-277ENST00000515219 CD300CQ08708 224 aa12.32□□□□□ -0.44
DDR1-277ENST00000515219 BTN1A1Q13410 526 aa12.32□□□□□ -0.44
DDR1-277ENST00000515219 FAM210BQ96KR6 192 aa12.32□□□□□ -0.44
DDR1-277ENST00000515219 ZNF492Q9P255 531 aa12.32□□□□□ -0.44
DDR1-277ENST00000515219 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 CRISP2P16562 243 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 ZNF138P52744 262 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 SERF2P84101 59 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 RPL7L1Q6DKI1 246 aaKnown RBP12.31□□□□□ -0.44
DDR1-277ENST00000515219 Q8TAT8 98 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 HYLS1Q96M11 299 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 SH3BGRL3Q9H299 93 aa12.31□□□□□ -0.44
DDR1-277ENST00000515219 RBAKDNA6NC62 111 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 PGPA6NDG6 321 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 SNURFLB1AK76 121 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 G3V3Q6 166 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 MBP02144 154 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 NMBP08949 121 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 OTORQ9NRC9 128 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
DDR1-277ENST00000515219 ZNF324O75467 553 aaPredicted RBP12.29□□□□□ -0.44
DDR1-277ENST00000515219 ATP5G1P05496 136 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 ARL14EPLP0DKL9 152 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 P0DMU3 169 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 ATP5G3P48201 142 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 PRR9Q5T870 116 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 TMEM88Q6PEY1 159 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 ZFAND2AQ8N6M9 145 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 RAB24Q969Q5 203 aa12.29□□□□□ -0.44
DDR1-277ENST00000515219 GNPNAT1Q96EK6 184 aaPredicted RBP12.29□□□□□ -0.44
DDR1-277ENST00000515219 CBY3A6NI87 242 aa12.28□□□□□ -0.44
DDR1-277ENST00000515219 F5H768 121 aa12.28□□□□□ -0.44
DDR1-277ENST00000515219 ARPC5O15511 151 aa12.28□□□□□ -0.44
DDR1-277ENST00000515219 STAG3L2P0CL84 134 aa12.28□□□□□ -0.44
DDR1-277ENST00000515219 STAG3L3P0CL85 134 aa12.28□□□□□ -0.44
DDR1-277ENST00000515219 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
DDR1-277ENST00000515219 SMLR1H3BR10 107 aa12.27□□□□□ -0.45
DDR1-277ENST00000515219 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.45
DDR1-277ENST00000515219 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.45
DDR1-277ENST00000515219 GAGE12BA1L429 117 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 RGS13O14921 159 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 GAGE7O76087 117 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 GAGE12FP0CL80 117 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 GAGE12GP0CL81 117 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 GAGE12IP0CL82 117 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 GCHFRP30047 84 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 POM121L12Q8N7R1 296 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 LINC00467Q9BRT7 94 aa12.26□□□□□ -0.45
DDR1-277ENST00000515219 VPS13DQ5THJ4 4388 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 TAAR5O14804 337 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 CXorf1O96002 111 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 Q6ZQT7 251 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 GOLT1AQ6ZVE7 132 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 UBE2DNLQ8IWF7 75 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
DDR1-277ENST00000515219 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 GNG5P63218 68 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 ANXA2RQ3ZCQ2 193 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
DDR1-277ENST00000515219 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms