RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 IQCF2Q8IXL9 164 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 LINC01587Q99440 93 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 ZNF705GA8MUZ8 300 aaPredicted RBP10.04□□□□□ -0.8
USP46-209ENST00000514536 DIRC3C9JPN6 131 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 EMP1P54849 157 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 EIF5AP63241 154 aaKnown RBP10.04□□□□□ -0.8
USP46-209ENST00000514536 RRN3P1Q2M238 152 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 FAM74A1Q5RGS3 127 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 TMEM78Q5T7P6 136 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 CMTM2Q8TAZ6 248 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 RXFP4Q8TDU9 374 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 ODF3Q96PU9 254 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
USP46-209ENST00000514536 FGF8P55075 233 aaPredicted RBP10.03□□□□□ -0.8
USP46-209ENST00000514536 GFI1BQ5VTD9 330 aa10.03□□□□□ -0.8
USP46-209ENST00000514536 TMPRSS5Q9H3S3 457 aa10.03□□□□□ -0.8
USP46-209ENST00000514536 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
USP46-209ENST00000514536 HTN1P15515 57 aa10.02□□□□□ -0.81
USP46-209ENST00000514536 FHITP49789 147 aa10.02□□□□□ -0.81
USP46-209ENST00000514536 TMEM256Q8N2U0 113 aa10.02□□□□□ -0.81
USP46-209ENST00000514536 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
USP46-209ENST00000514536 ZNF492Q9P255 531 aa10.02□□□□□ -0.81
USP46-209ENST00000514536 CELA1Q9UNI1 258 aa10.02□□□□□ -0.81
USP46-209ENST00000514536 TRAV12-3A0A0B4J271 114 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 RBAKDNA6NC62 111 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 SLC25A5P05141 298 aaKnown RBP10.01□□□□□ -0.81
USP46-209ENST00000514536 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
USP46-209ENST00000514536 AZU1P20160 251 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 ZNF138P52744 262 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 TMED6Q8WW62 240 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 C20orf144Q9BQM9 153 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 MAP1LC3B2A6NCE7 125 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 UMAD1C9J7I0 102 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 RNASE4P34096 147 aaKnown RBP10.01□□□□□ -0.81
USP46-209ENST00000514536 TAS2R60P59551 318 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 SUMO1P63165 101 aaKnown RBP10.01□□□□□ -0.81
USP46-209ENST00000514536 GNG5P63218 68 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 GOLT1AQ6ZVE7 132 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 Q8TAT8 98 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 STOML3Q8TAV4 291 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 PHLDA1Q8WV24 401 aaPredicted RBP10.01□□□□□ -0.81
USP46-209ENST00000514536 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
USP46-209ENST00000514536 DNAH7Q8WXX0 4024 aa10□□□□□ -0.81
USP46-209ENST00000514536 KLLNB2CW77 178 aa10□□□□□ -0.81
USP46-209ENST00000514536 H7BYZ3 331 aa10□□□□□ -0.81
USP46-209ENST00000514536 GPX1P07203 203 aa10□□□□□ -0.81
USP46-209ENST00000514536 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
USP46-209ENST00000514536 CRISP2P16562 243 aa10□□□□□ -0.81
USP46-209ENST00000514536 CEMP1Q6PRD7 247 aaPredicted RBP10□□□□□ -0.81
USP46-209ENST00000514536 ZNF767PQ75MW2 155 aa10□□□□□ -0.81
USP46-209ENST00000514536 ZFAND2AQ8N6M9 145 aa10□□□□□ -0.81
USP46-209ENST00000514536 ARL6IP6Q8N6S5 226 aa10□□□□□ -0.81
USP46-209ENST00000514536 FAM213BQ8TBF2 198 aa10□□□□□ -0.81
USP46-209ENST00000514536 YTHDF2Q9Y5A9 579 aaKnown RBP10□□□□□ -0.81
USP46-209ENST00000514536 C7orf71A4D174 169 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 UBE2G2P60604 165 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 BTN1A1Q13410 526 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 C12orf74Q32Q52 190 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 ZFP69Q49AA0 526 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 C5orf17Q8NAS9 161 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
USP46-209ENST00000514536 DYNC2H1Q8NCM8 4307 aaKnown RBP9.98□□□□□ -0.81
USP46-209ENST00000514536 A0A1W2PRE2 83 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 NUPR2A6NF83 97 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 GGTLC3B5MD39 225 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 NMBP08949 121 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 PRR9Q5T870 116 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 FAM222AQ5U5X8 452 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 SFT2D1Q8WV19 159 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 SGK494Q96LW2 274 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 DKK2Q9UBU2 259 aa9.98□□□□□ -0.81
USP46-209ENST00000514536 TRAV8-1A0A0A6YYK1 113 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 TRBV7-9A0A0J9YWB2 115 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 ZNF324O75467 553 aaPredicted RBP9.97□□□□□ -0.81
USP46-209ENST00000514536 TCRAP04437 139 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 DPPA3Q6W0C5 159 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 Q6ZTC4 211 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 SLC51BQ86UW2 128 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 C9orf62Q8N4C0 152 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 EPDR1Q9UM22 224 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 A0A1B0GV50 99 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 PLAC8L1A1L4L8 177 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 EIF5AL1Q6IS14 154 aaKnown RBP9.97□□□□□ -0.81
USP46-209ENST00000514536 Q6ZQT7 251 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 CCDC28AQ8IWP9 274 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 C16orf74Q96GX8 76 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 KLK5Q9Y337 293 aaPredicted RBP9.97□□□□□ -0.81
USP46-209ENST00000514536 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
USP46-209ENST00000514536 TENM2Q9NT68 2774 aa9.96□□□□□ -0.81
USP46-209ENST00000514536 FAM74A7A6NL05 159 aa9.96□□□□□ -0.82
USP46-209ENST00000514536 IFNA7P01567 189 aa9.96□□□□□ -0.82
USP46-209ENST00000514536 H2AFB1P0C5Y9 115 aa9.96□□□□□ -0.82
USP46-209ENST00000514536 ZNF493Q6ZR52 646 aa9.96□□□□□ -0.82
USP46-209ENST00000514536 TVP23CQ96ET8 276 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms