RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ZNF253O75346 499 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 S100PP25815 95 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 GALR1P47211 349 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 GNG4P50150 75 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 CENPWQ5EE01 88 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 FAM231DQ6ZW35 169 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 SPAG8Q99932 426 aaPredicted RBP6.23□□□□□ -1.41
CCL28-204ENST00000514421 ATG101Q9BSB4 218 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 SRD5A3Q9H8P0 318 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 SELENOKQ9Y6D0 94 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 U3KQE9 123 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 IGHV3-49A0A0A0MS15 119 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 PGPEP1LA6NFU8 196 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 C5orf52A6NGY3 159 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 APOHP02749 345 aaPredicted RBP6.22□□□□□ -1.41
CCL28-204ENST00000514421 CD7P09564 240 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
CCL28-204ENST00000514421 IGHV4-30-4P0DP06 118 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 CNN1P51911 297 aaKnown RBP6.22□□□□□ -1.41
CCL28-204ENST00000514421 CMC4P56277 68 aaPredicted RBP6.22□□□□□ -1.41
CCL28-204ENST00000514421 PAFAH1B2P68402 229 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 C1orf194Q5T5A4 169 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 LEMD1Q68G75 181 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 KCNIP4Q6PIL6 250 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 SIGLEC15Q6ZMC9 328 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 OR10G8Q8NGN5 311 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 FMC1Q96HJ9 113 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 Q9H3A6 140 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 BIN3Q9NQY0 253 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 C19orf73Q9NVV2 129 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 IL36BQ9NZH7 164 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 V9GYV3 84 aa6.22□□□□□ -1.41
CCL28-204ENST00000514421 A0A087X0K7 114 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 IGHV3-66A0A0C4DH42 116 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 SERTM2A0A1B0GWG4 89 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 PGPA6NDG6 321 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 OR4C46A6NHA9 309 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 OR11H12B2RN74 326 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 UBE2CO00762 179 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 LTAP01374 205 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 IGLV2-11P01706 119 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 TCRAP04437 139 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 FRMD6-AS1P0C7T7 363 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 RPL7P18124 248 aaKnown RBP6.21□□□□□ -1.42
CCL28-204ENST00000514421 FAM3BP58499 235 aaPredicted RBP6.21□□□□□ -1.42
CCL28-204ENST00000514421 RANP62826 216 aaKnown RBP6.21□□□□□ -1.42
CCL28-204ENST00000514421 TCF24Q7RTU0 167 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 COX8CQ7Z4L0 72 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 DEFB125Q8N687 156 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 GPR82Q96P67 336 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 RABAC1Q9UI14 185 aa6.21□□□□□ -1.42
CCL28-204ENST00000514421 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
CCL28-204ENST00000514421 BUB3O43684 328 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 SLC25A5P05141 298 aaKnown RBP6.2□□□□□ -1.42
CCL28-204ENST00000514421 RPS10P46783 165 aaKnown RBP6.2□□□□□ -1.42
CCL28-204ENST00000514421 RPL11P62913 178 aaKnown RBP6.2□□□□□ -1.42
CCL28-204ENST00000514421 C16orf54Q6UWD8 224 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 TMEM75Q8N9X5 138 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 LINC00479Q96M42 142 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 C17orf77Q96MU5 243 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 ASCL2Q99929 193 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 ZNF492Q9P255 531 aa6.2□□□□□ -1.42
CCL28-204ENST00000514421 IGKV3-7A0A075B6H7 116 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 TRAV2A0A0B4J234 112 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 SMIM27A0A1W2PRY6 76 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 C19orf71A6NCJ1 209 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BKO60814 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BJP06899 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BOP23527 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BBP33778 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 TFPI2P48307 235 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 MEOX2P50222 304 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BDP58876 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BCP62807 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 PSG9Q00887 426 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST2H2BEQ16778 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 CT83Q5H943 113 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 COA6Q5JTJ3 125 aaKnown RBP6.19□□□□□ -1.42
CCL28-204ENST00000514421 ACTL10Q5JWF8 245 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.19□□□□□ -1.42
CCL28-204ENST00000514421 LINC00322Q6ZN03 302 aaPredicted RBP6.19□□□□□ -1.42
CCL28-204ENST00000514421 BAGE2Q86Y30 109 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 WFDC3Q8IUB2 231 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 SBSPONQ8IVN8 264 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 GBGT1Q8N5D6 347 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 BLNKQ8WV28 456 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BHQ93079 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BNQ99877 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 HIST1H2BMQ99879 126 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 MS4A6AQ9H2W1 248 aa6.19□□□□□ -1.42
CCL28-204ENST00000514421 SLC17A3O00476 420 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 TRGC2P03986 189 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 ERVFC1-1P60608 527 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 GNG5P63218 68 aa6.18□□□□□ -1.42
CCL28-204ENST00000514421 OR5I1Q13606 314 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms