RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 SAT2Q96F10 170 aaPredicted RBP6.56□□□□□ -1.36
TCOF1-212ENST00000513538 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 GSN-AS1Q9NRJ2 163 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
TCOF1-212ENST00000513538 WDR83OSQ9Y284 106 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 MYCBP2O75592 4640 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 IGSF23A1L1A6 192 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 C5orf51A6NDU8 294 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 FAM25EA8MYX2 175 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 NPIPB6E9PJ23 425 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 L7N2F9 121 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 GOSR2O14653 212 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 CST7O76096 145 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
TCOF1-212ENST00000513538 SULT1A1P50225 295 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 ERVFC1-1P60608 527 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 VAMP2P63027 116 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 OPCMLQ14982 345 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 MZT2BQ6NZ67 158 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 FRZBQ92765 325 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 ODF3Q96PU9 254 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 PTTG2Q9NZH5 202 aa6.55□□□□□ -1.36
TCOF1-212ENST00000513538 TRGV2A0A075B6R0 118 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 TRAV5A0A0B4J249 113 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 LEPP41159 167 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 RPL29P47914 159 aaKnown RBP6.54□□□□□ -1.36
TCOF1-212ENST00000513538 CAMLGP49069 296 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 CAV2P51636 162 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 CD300CQ08708 224 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 MIC13Q5XKP0 118 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 NRARPQ7Z6K4 114 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 FUT9Q9Y231 359 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 KLF12Q9Y4X4 402 aa6.54□□□□□ -1.36
TCOF1-212ENST00000513538 TRGV1A0A0A0MS02 117 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 KLLNB2CW77 178 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 H0YIZ8 118 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 M0R3E3 92 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 SPINK4O60575 86 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 ZNF324O75467 553 aaPredicted RBP6.53□□□□□ -1.36
TCOF1-212ENST00000513538 IGHV3-53P01767 116 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 PVALBP20472 110 aaPredicted RBP6.53□□□□□ -1.36
TCOF1-212ENST00000513538 S100A11P31949 105 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 BCAP31P51572 246 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 BTN1A1Q13410 526 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 ICAM4Q14773 271 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 ATP6V1FQ16864 119 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 PRR9Q5T870 116 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 Q6ZQT7 251 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 BPIFA4PQ86YQ2 179 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 FAM19A4Q96LR4 140 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 MARVELD1Q9BSK0 173 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 NMES1Q9C002 83 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 DNAJC4Q9NNZ3 241 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 UQCC1Q9NVA1 299 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
TCOF1-212ENST00000513538 C7orf71A4D174 169 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 INMT-MINDY4F8WBC2 141 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 EREGO14944 169 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 PAX4O43316 350 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 COX7A2P2O60397 106 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 PRAF2O60831 178 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 SIX6O95475 246 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 TCL1AP56279 114 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 NHLH2Q02577 135 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 ERCC8Q13216 396 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 C10orf113Q5VZT2 155 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 LYPD5Q6UWN5 251 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 ZNF680Q8NEM1 530 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 ENKURQ8TC29 256 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 ST6GAL2Q96JF0 529 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 LINC00467Q9BRT7 94 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 GPN1Q9HCN4 374 aaPredicted RBP6.52□□□□□ -1.37
TCOF1-212ENST00000513538 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
TCOF1-212ENST00000513538 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
TCOF1-212ENST00000513538 SLC25A5P05141 298 aaKnown RBP6.51□□□□□ -1.37
TCOF1-212ENST00000513538 CRYBA4P53673 196 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 H2BFSP57053 126 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 S100A10P60903 97 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 RAB31Q13636 194 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 FHL2Q14192 279 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 Q6ZRG5 221 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 EIF4E3Q8N5X7 224 aaKnown RBP6.51□□□□□ -1.37
TCOF1-212ENST00000513538 OR1L4Q8NGR5 311 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 SLC39A9Q9NUM3 307 aa6.51□□□□□ -1.37
TCOF1-212ENST00000513538 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
TCOF1-212ENST00000513538 UBE2L5PA0A1B0GUS4 154 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 E5RGE8 158 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 ZNF253O75346 499 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 MPDU1O75352 247 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 NDUFB4O95168 129 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 IFNA5P01569 189 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 GCSHP23434 173 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms