RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 OR10J6PQ8NGY7 276 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
CXCL3-204ENST00000511669 CRYBG3Q68DQ2 2970 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 TRAV8-2A0A0B4J237 113 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 AMBPP02760 352 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 ESDP10768 282 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 MYOZ3Q8TDC0 251 aa12.59□□□□□ -0.39
CXCL3-204ENST00000511669 FBN2P35556 2912 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 NAV2Q8IVL1 2488 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
CXCL3-204ENST00000511669 SRIP30626 198 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 S100A12P80511 92 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
CXCL3-204ENST00000511669 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 REC114Q7Z4M0 266 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 Q8TAT8 98 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
CXCL3-204ENST00000511669 M0QZ24 198 aa12.57□□□□□ -0.4
CXCL3-204ENST00000511669 LGALS9O00182 355 aa12.57□□□□□ -0.4
CXCL3-204ENST00000511669 FRMD6-AS1P0C7T7 363 aa12.57□□□□□ -0.4
CXCL3-204ENST00000511669 CRIP1P50238 77 aa12.57□□□□□ -0.4
CXCL3-204ENST00000511669 IL17RELQ6ZVW7 336 aa12.57□□□□□ -0.4
CXCL3-204ENST00000511669 PTPN13Q12923 2485 aa12.56□□□□□ -0.4
CXCL3-204ENST00000511669 ERCC8Q13216 396 aa12.56□□□□□ -0.4
CXCL3-204ENST00000511669 TM4SF20Q53R12 229 aa12.56□□□□□ -0.4
CXCL3-204ENST00000511669 GZMBP10144 247 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 SLAQ13239 276 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 SAMD10Q9BYL1 202 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 AGPAT4-IT1Q9H0P7 198 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 YAE1D1Q9NRH1 226 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 CSPG4Q6UVK1 2322 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 PRAC2D3DTV9 90 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 SERF1AO75920 110 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 ORM1P02763 201 aa12.55□□□□□ -0.4
CXCL3-204ENST00000511669 KLF5Q13887 457 aaPredicted RBP12.55□□□□□ -0.4
CXCL3-204ENST00000511669 TRBV7-9A0A0J9YWB2 115 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 SOCS3O14543 225 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 LINC01559Q495D7 138 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 TMEM256Q8N2U0 113 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 TPPP3Q9BW30 176 aa12.54□□□□□ -0.4
CXCL3-204ENST00000511669 F2Z2F3 143 aa12.53□□□□□ -0.4
CXCL3-204ENST00000511669 PYY3Q5JQD4 70 aa12.53□□□□□ -0.4
CXCL3-204ENST00000511669 GATD1Q8NB37 220 aa12.53□□□□□ -0.4
CXCL3-204ENST00000511669 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
CXCL3-204ENST00000511669 ARMS2P0C7Q2 107 aa12.52□□□□□ -0.4
CXCL3-204ENST00000511669 JOSD1Q15040 202 aaPredicted RBP12.52□□□□□ -0.4
CXCL3-204ENST00000511669 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.4
CXCL3-204ENST00000511669 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.4
CXCL3-204ENST00000511669 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.4
CXCL3-204ENST00000511669 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.4
CXCL3-204ENST00000511669 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.4
CXCL3-204ENST00000511669 SSBP4Q9BWG4 385 aaPredicted RBP12.52□□□□□ -0.4
CXCL3-204ENST00000511669 TMSB15BA0A087X1C1 80 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 DNAJC9-AS1A6NH13 148 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 CTRLP40313 264 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
CXCL3-204ENST00000511669 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 DPF1Q92782 380 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 DUX5Q96PT3 197 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 TMEM160Q9NX00 188 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
CXCL3-204ENST00000511669 PCP4L1A6NKN8 68 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 PRB4P10163 310 aaPredicted RBP12.51□□□□□ -0.41
CXCL3-204ENST00000511669 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
CXCL3-204ENST00000511669 Q71RC1 249 aaPredicted RBP12.51□□□□□ -0.41
CXCL3-204ENST00000511669 C18orf32Q8TCD1 76 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 C4orf3Q8WVX3 66 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 PEMTQ9UBM1 199 aa12.51□□□□□ -0.41
CXCL3-204ENST00000511669 POLQO75417 2590 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 IGHV4OR15-8A0A075B7B6 117 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 A0A087WW49 117 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 TMEM213A2RRL7 107 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 HOXD3P31249 432 aaPredicted RBP12.5□□□□□ -0.41
CXCL3-204ENST00000511669 SYNJ2BPP57105 145 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 C20orf173Q96LM9 149 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 CELSR2Q9HCU4 2923 aa12.5□□□□□ -0.41
CXCL3-204ENST00000511669 FAM181BA6NEQ2 426 aa12.49□□□□□ -0.41
CXCL3-204ENST00000511669 LINC01619G3V211 115 aa12.49□□□□□ -0.41
CXCL3-204ENST00000511669 GPX1P07203 203 aa12.49□□□□□ -0.41
CXCL3-204ENST00000511669 OR8A1Q8NGG7 326 aa12.49□□□□□ -0.41
CXCL3-204ENST00000511669 ZNF418Q8TF45 676 aaPredicted RBP12.49□□□□□ -0.41
CXCL3-204ENST00000511669 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
CXCL3-204ENST00000511669 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
CXCL3-204ENST00000511669 A0A1B0GUS0 222 aa12.48□□□□□ -0.41
CXCL3-204ENST00000511669 HSBP1O75506 76 aa12.48□□□□□ -0.41
CXCL3-204ENST00000511669 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
CXCL3-204ENST00000511669 AMTP48728 403 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms