RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ATP5L2Q7Z4Y8 100 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 OR11H2Q8NH07 326 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 TMEM70Q9BUB7 260 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 ZNF747Q9BV97 191 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 A0A1B0GW64 132 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 LINC01548A6NM66 108 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 CRYGBP07316 175 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 PTTG1IPP53801 180 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 VWC2Q2TAL6 325 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 ZNF493Q6ZR52 646 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 SPTBN1Q01082 2364 aaKnown RBP3.96□□□□□ -1.78
PHF3-210ENST00000509876 RPL23P62829 140 aaKnown RBP3.95□□□□□ -1.78
PHF3-210ENST00000509876 CRIP3Q6Q6R5 217 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 LENEPQ9Y5L5 61 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 UTRNP46939 3433 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 LGALS3P17931 250 aaKnown RBP3.95□□□□□ -1.78
PHF3-210ENST00000509876 PSMB8P28062 276 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 SRSF1Q07955 248 aaKnown RBP eCLIP3.95□□□□□ -1.78
PHF3-210ENST00000509876 CIRBPQ14011 172 aaKnown RBP3.95□□□□□ -1.78
PHF3-210ENST00000509876 ORMDL2Q53FV1 153 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 SCGB3A1Q96QR1 104 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 M0R2P5 195 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 TRBV12-3P01733 135 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 CCDC140Q96MF4 163 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 PAX4O43316 350 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 ATP5G1P05496 136 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 LYZL1Q6UWQ5 148 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 TRPT1Q86TN4 253 aaKnown RBP3.95□□□□□ -1.78
PHF3-210ENST00000509876 OCC1Q8TAD7 63 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 FANCD2OSQ96PS1 177 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 BUB3O43684 328 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 ATP5LO75964 103 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 PRR20EP86478 221 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 PRR20CP86479 221 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 PRR20DP86480 221 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 PRR20BP86481 221 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 PRR20AP86496 221 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 C8orf49Q96NF6 230 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 NOP10Q9NPE3 64 aaKnown RBP3.95□□□□□ -1.78
PHF3-210ENST00000509876 ZNF492Q9P255 531 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 OR5A1Q8NGJ0 315 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 FXYD5Q96DB9 178 aa3.95□□□□□ -1.78
PHF3-210ENST00000509876 TRAV8-1A0A0A6YYK1 113 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 TRAV2A0A0B4J234 112 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 PLP1P60201 277 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 IQCJQ1A5X6 159 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 DEFB135Q30KP9 77 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 DEFB125Q8N687 156 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 IMMP2LQ96T52 175 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 C20orf144Q9BQM9 153 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 GFRA4Q9GZZ7 299 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 MAP6D1Q9H9H5 199 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 MALRD1Q5VYJ5 2156 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 ARID1AO14497 2285 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 IGKV1-17P01599 117 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 CCL18P55774 89 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 ANXA2RQ3ZCQ2 193 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 TMEM61Q8N0U2 210 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 TGIF2-C20orf24A0A0A6YYL0 155 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 CRXO43186 299 aaPredicted RBP3.94□□□□□ -1.78
PHF3-210ENST00000509876 ARMS2P0C7Q2 107 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 CBLN2Q8IUK8 224 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 IGF2BP2-AS1Q96M15 143 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 VCX2Q9H322 139 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 NXT2Q9NPJ8 142 aaKnown RBP3.94□□□□□ -1.78
PHF3-210ENST00000509876 CYSLTR1Q9Y271 337 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 ANKHD1Q8IWZ3 2542 aaKnown RBP3.94□□□□□ -1.78
PHF3-210ENST00000509876 A0A087WWC5 75 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 A0A087X0K7 114 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 KLF5Q13887 457 aaPredicted RBP3.94□□□□□ -1.78
PHF3-210ENST00000509876 RHOHQ15669 191 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 DEFB114Q30KQ6 69 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 HIVEP2P31629 2446 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 KIAA1549Q9HCM3 1950 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 TRBV25-1A0A075B6N4 114 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 A0A087WWL8 130 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 GAGE12JA6NER3 117 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 APOHP02749 345 aaPredicted RBP3.94□□□□□ -1.78
PHF3-210ENST00000509876 GAGE1Q13065 139 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 GAGE4Q13068 117 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 GAGE5Q13069 117 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 GAGE13Q4V321 117 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 C14orf178Q8N769 122 aaPredicted RBP3.94□□□□□ -1.78
PHF3-210ENST00000509876 MRAP2Q96G30 205 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 POLEQ07864 2286 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 ROS1P08922 2347 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 F6UB75 175 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 VCYO14598 125 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 SCO1O75880 301 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 UTF1Q5T230 341 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 DMRTA1Q5VZB9 504 aa3.94□□□□□ -1.78
PHF3-210ENST00000509876 PCNX3Q9H6A9 2034 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 IGLV1-40P01703 118 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 GZMBP10144 247 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 UNQ9165/PRO28630Q6UXU0 137 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms