RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ANXA2RQ3ZCQ2 193 aa10.8□□□□□ -0.68
RAB40C-202ENST00000509637 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
RAB40C-202ENST00000509637 VGLL1Q99990 258 aa10.8□□□□□ -0.68
RAB40C-202ENST00000509637 BATF3Q9NR55 127 aa10.8□□□□□ -0.68
RAB40C-202ENST00000509637 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
RAB40C-202ENST00000509637 LSM5Q9Y4Y9 91 aaKnown RBP10.8□□□□□ -0.68
RAB40C-202ENST00000509637 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
RAB40C-202ENST00000509637 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
RAB40C-202ENST00000509637 IGSF23A1L1A6 192 aa10.79□□□□□ -0.68
RAB40C-202ENST00000509637 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
RAB40C-202ENST00000509637 S100A7AQ86SG5 101 aa10.79□□□□□ -0.68
RAB40C-202ENST00000509637 EIF4E3Q8N5X7 224 aaKnown RBP10.79□□□□□ -0.68
RAB40C-202ENST00000509637 SLC39A9Q9NUM3 307 aa10.79□□□□□ -0.68
RAB40C-202ENST00000509637 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
RAB40C-202ENST00000509637 A0A087WTM6 91 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 A6NHS1 94 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 PAX4O43316 350 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 PRAF2O60831 178 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 ZNF253O75346 499 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 CRISP2P16562 243 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 RPL29P47914 159 aaKnown RBP10.78□□□□□ -0.68
RAB40C-202ENST00000509637 CRYBA4P53673 196 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 HAMPP81172 84 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
RAB40C-202ENST00000509637 FAM167A-AS1Q96KT0 104 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 MDFICQ9P1T7 246 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
RAB40C-202ENST00000509637 SMR3BP02814 79 aaPredicted RBP10.77□□□□□ -0.69
RAB40C-202ENST00000509637 GUK1Q16774 197 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 Q5VSD8 79 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 ST6GAL2Q96JF0 529 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 LINC00477Q96M19 166 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 TMEM14CQ9P0S9 112 aa10.77□□□□□ -0.69
RAB40C-202ENST00000509637 HIST1H1EP10412 219 aaKnown RBP10.76□□□□□ -0.69
RAB40C-202ENST00000509637 IL7P13232 177 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 SPANXN2Q5MJ10 180 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 Q6ZRG5 221 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 TMEM252Q8N6L7 170 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 CHAC2Q8WUX2 184 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 BLNKQ8WV28 456 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 UQCC1Q9NVA1 299 aa10.76□□□□□ -0.69
RAB40C-202ENST00000509637 DMBT1Q9UGM3 2413 aaPredicted RBP10.75□□□□□ -0.69
RAB40C-202ENST00000509637 MYCBP2O75592 4640 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 UBE2L5PA0A1B0GUS4 154 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 MPDU1O75352 247 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 SFTA3P0C7M3 94 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 BCAP31P51572 246 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 CAV2P51636 162 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 ICAM4Q14773 271 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 TRIQKQ629K1 86 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 MIR17HGQ75NE6 70 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 OR1L4Q8NGR5 311 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
RAB40C-202ENST00000509637 L7N2F9 121 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 VAMP2P63027 116 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 IBA57Q5T440 356 aaKnown RBP10.74□□□□□ -0.69
RAB40C-202ENST00000509637 Q8TAT8 98 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 ZNF492Q9P255 531 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 PRO0255Q9UI72 69 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
RAB40C-202ENST00000509637 IGHV1OR15-1A0A075B7D0 117 aa10.73□□□□□ -0.69
RAB40C-202ENST00000509637 FAM25EA8MYX2 175 aa10.73□□□□□ -0.69
RAB40C-202ENST00000509637 GPX1P07203 203 aa10.73□□□□□ -0.69
RAB40C-202ENST00000509637 RAB32Q13637 225 aa10.73□□□□□ -0.69
RAB40C-202ENST00000509637 CNPY1Q3B7I2 92 aa10.73□□□□□ -0.69
RAB40C-202ENST00000509637 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
RAB40C-202ENST00000509637 TRAV6A0A075B6T7 132 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 E5RGE8 158 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 TCRBP04435 133 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 FGF7P21781 194 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 INPP1P49441 399 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 SULT1A1P50225 295 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 BAXQ07812 192 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 C2orf50Q96LR7 162 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 PFDN5Q99471 154 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 MRPL32Q9BYC8 188 aaKnown RBP10.72□□□□□ -0.69
RAB40C-202ENST00000509637 LYRM2Q9NU23 88 aaPredicted RBP10.72□□□□□ -0.69
RAB40C-202ENST00000509637 PRELID1Q9Y255 219 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 TIMM9Q9Y5J7 89 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
RAB40C-202ENST00000509637 LOC100131303A0A0U1RQF7 123 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 C5orf51A6NDU8 294 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 K7EQD1 137 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 NHLH2Q02577 135 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 RAB31Q13636 194 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 PDE6HQ13956 83 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 MRPL23Q16540 153 aaKnown RBP10.71□□□□□ -0.69
RAB40C-202ENST00000509637 MUC21Q5SSG8 566 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 CDPF1Q6NVV7 123 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 LINC00299Q6ZSB3 139 aa10.71□□□□□ -0.69
RAB40C-202ENST00000509637 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms