RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 MRPL16Q9NX20 251 aaKnown RBP9.06□□□□□ -0.96
DDX41-210ENST00000509576 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
DDX41-210ENST00000509576 IGSF23A1L1A6 192 aa9.05□□□□□ -0.96
DDX41-210ENST00000509576 PLA2G10O15496 165 aa9.05□□□□□ -0.96
DDX41-210ENST00000509576 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
DDX41-210ENST00000509576 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
DDX41-210ENST00000509576 CRYBA4P53673 196 aa9.05□□□□□ -0.96
DDX41-210ENST00000509576 LYPD5Q6UWN5 251 aa9.05□□□□□ -0.96
DDX41-210ENST00000509576 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
DDX41-210ENST00000509576 MDFICQ9P1T7 246 aa9.05□□□□□ -0.96
DDX41-210ENST00000509576 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 ZNF253O75346 499 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
DDX41-210ENST00000509576 CRISP2P16562 243 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 RNASE4P34096 147 aaKnown RBP9.04□□□□□ -0.96
DDX41-210ENST00000509576 IL15RAQ13261 267 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
DDX41-210ENST00000509576 MRPL53Q96EL3 112 aaKnown RBP9.04□□□□□ -0.96
DDX41-210ENST00000509576 ST6GAL2Q96JF0 529 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 FAM167A-AS1Q96KT0 104 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 SLC39A9Q9NUM3 307 aa9.04□□□□□ -0.96
DDX41-210ENST00000509576 LSM5Q9Y4Y9 91 aaKnown RBP9.04□□□□□ -0.96
DDX41-210ENST00000509576 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 PAX4O43316 350 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 PRAF2O60831 178 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 RPL29P47914 159 aaKnown RBP9.03□□□□□ -0.96
DDX41-210ENST00000509576 GUK1Q16774 197 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 C9orf47Q6ZRZ4 202 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 ZNF680Q8NEM1 530 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 SEC22CQ9BRL7 303 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 SLC25A2Q9BXI2 301 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
DDX41-210ENST00000509576 UBE2L5PA0A1B0GUS4 154 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 NOL3O60936 208 aaKnown RBP9.02□□□□□ -0.97
DDX41-210ENST00000509576 SFTA3P0C7M3 94 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 IL7P13232 177 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 S100A5P33763 92 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 IBA57Q5T440 356 aaKnown RBP9.02□□□□□ -0.97
DDX41-210ENST00000509576 S100A7AQ86SG5 101 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 Q8TAT8 98 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 TMEM14CQ9P0S9 112 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 ICOSQ9Y6W8 199 aa9.02□□□□□ -0.97
DDX41-210ENST00000509576 MPDU1O75352 247 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 HIST1H1EP10412 219 aaKnown RBP9.01□□□□□ -0.97
DDX41-210ENST00000509576 ERVFC1-1P60608 527 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 BLNKQ8WV28 456 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 ZNF479Q96JC4 524 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 LINC00477Q96M19 166 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 C20orf85Q9H1P6 137 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 UQCC1Q9NVA1 299 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
DDX41-210ENST00000509576 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
DDX41-210ENST00000509576 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
DDX41-210ENST00000509576 K7EQD1 137 aa9□□□□□ -0.97
DDX41-210ENST00000509576 CAV2P51636 162 aa9□□□□□ -0.97
DDX41-210ENST00000509576 ICAM4Q14773 271 aa9□□□□□ -0.97
DDX41-210ENST00000509576 SPANXN2Q5MJ10 180 aa9□□□□□ -0.97
DDX41-210ENST00000509576 TRIQKQ629K1 86 aa9□□□□□ -0.97
DDX41-210ENST00000509576 FAM122CQ6P4D5 195 aa9□□□□□ -0.97
DDX41-210ENST00000509576 Q6ZRG5 221 aa9□□□□□ -0.97
DDX41-210ENST00000509576 MIR17HGQ75NE6 70 aa9□□□□□ -0.97
DDX41-210ENST00000509576 TMEM252Q8N6L7 170 aa9□□□□□ -0.97
DDX41-210ENST00000509576 OR1L4Q8NGR5 311 aa9□□□□□ -0.97
DDX41-210ENST00000509576 CHAC2Q8WUX2 184 aa9□□□□□ -0.97
DDX41-210ENST00000509576 ZNF492Q9P255 531 aa9□□□□□ -0.97
DDX41-210ENST00000509576 PRO0255Q9UI72 69 aa9□□□□□ -0.97
DDX41-210ENST00000509576 HHLA3Q9XRX5 114 aa9□□□□□ -0.97
DDX41-210ENST00000509576 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
DDX41-210ENST00000509576 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 GPX1P07203 203 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 BCAP31P51572 246 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 BAXQ07812 192 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 RAB32Q13637 225 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 FXYD5Q96DB9 178 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 PHYHIPLQ96FC7 376 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 PFDN5Q99471 154 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 LYRM2Q9NU23 88 aaPredicted RBP8.99□□□□□ -0.97
DDX41-210ENST00000509576 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
DDX41-210ENST00000509576 TRAV6A0A075B6T7 132 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 CCDC160A6NGH7 325 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 FAM25EA8MYX2 175 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 E5RGE8 158 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 L7N2F9 121 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 FGF7P21781 194 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 SULT1A1P50225 295 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 VAMP2P63027 116 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 PDE6HQ13956 83 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 MUC21Q5SSG8 566 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 NPCDR1Q9BY65 106 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 MRPL32Q9BYC8 188 aaKnown RBP8.98□□□□□ -0.97
DDX41-210ENST00000509576 PRELID1Q9Y255 219 aa8.98□□□□□ -0.97
DDX41-210ENST00000509576 NMBP08949 121 aa8.97□□□□□ -0.97
DDX41-210ENST00000509576 NHLH2Q02577 135 aa8.97□□□□□ -0.97
DDX41-210ENST00000509576 NEGR1Q7Z3B1 354 aa8.97□□□□□ -0.97
DDX41-210ENST00000509576 C2orf50Q96LR7 162 aa8.97□□□□□ -0.97
DDX41-210ENST00000509576 MSRB1Q9NZV6 116 aa8.97□□□□□ -0.97
DDX41-210ENST00000509576 RGS13O14921 159 aa8.96□□□□□ -0.98
DDX41-210ENST00000509576 EIF3GO75821 320 aaKnown RBP eCLIP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms