RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 VPS13DQ5THJ4 4388 aa13.2□□□□□ -0.3
UBE3D-207ENST00000509102 PLAC8L1A1L4L8 177 aa13.2□□□□□ -0.3
UBE3D-207ENST00000509102 F5H768 121 aa13.2□□□□□ -0.3
UBE3D-207ENST00000509102 UBE2L3P68036 154 aaKnown RBP13.2□□□□□ -0.3
UBE3D-207ENST00000509102 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
UBE3D-207ENST00000509102 KMT2AQ03164 3969 aa13.2□□□□□ -0.3
UBE3D-207ENST00000509102 C7orf71A4D174 169 aa13.19□□□□□ -0.3
UBE3D-207ENST00000509102 ERCC8Q13216 396 aa13.19□□□□□ -0.3
UBE3D-207ENST00000509102 FCN2Q15485 313 aa13.19□□□□□ -0.3
UBE3D-207ENST00000509102 LYPD1Q8N2G4 141 aa13.19□□□□□ -0.3
UBE3D-207ENST00000509102 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
UBE3D-207ENST00000509102 A0A1W2PPV4 95 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 GPX1P07203 203 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 NMBP08949 121 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 ZNF266Q14584 549 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 ACOT6Q3I5F7 207 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-207ENST00000509102 RNF212Q495C1 297 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 C9orf47Q6ZRZ4 202 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 ZNF680Q8NEM1 530 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
UBE3D-207ENST00000509102 BIRC6Q9NR09 4857 aa13.17□□□□□ -0.3
UBE3D-207ENST00000509102 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-207ENST00000509102 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-207ENST00000509102 RANP62826 216 aaKnown RBP13.17□□□□□ -0.3
UBE3D-207ENST00000509102 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
UBE3D-207ENST00000509102 KLLNB2CW77 178 aa13.16□□□□□ -0.3
UBE3D-207ENST00000509102 RNASE4P34096 147 aaKnown RBP13.16□□□□□ -0.3
UBE3D-207ENST00000509102 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
UBE3D-207ENST00000509102 ASB13Q8WXK3 278 aa13.16□□□□□ -0.3
UBE3D-207ENST00000509102 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
UBE3D-207ENST00000509102 CRISP2P16562 243 aa13.15□□□□□ -0.3
UBE3D-207ENST00000509102 M6PRP20645 277 aa13.15□□□□□ -0.3
UBE3D-207ENST00000509102 ZNF138P52744 262 aa13.15□□□□□ -0.3
UBE3D-207ENST00000509102 RXFP4Q8TDU9 374 aa13.15□□□□□ -0.3
UBE3D-207ENST00000509102 Q9H3A6 140 aa13.15□□□□□ -0.3
UBE3D-207ENST00000509102 NUDT3O95989 172 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 FAM3BP58499 235 aaPredicted RBP13.14□□□□□ -0.31
UBE3D-207ENST00000509102 BTN1A1Q13410 526 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 PQLC2Q6ZP29 291 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 LINC00336Q6ZUF6 198 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 EIF4E3Q8N5X7 224 aaKnown RBP13.14□□□□□ -0.31
UBE3D-207ENST00000509102 CMTM2Q8TAZ6 248 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 FAM19A4Q96LR4 140 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 VGLL1Q99990 258 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
UBE3D-207ENST00000509102 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 RBAKDNA6NC62 111 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 RGS13O14921 159 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 GAGE7O76087 117 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 DAZ2Q13117 558 aaKnown RBP13.13□□□□□ -0.31
UBE3D-207ENST00000509102 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
UBE3D-207ENST00000509102 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 WFDC1Q9HC57 220 aa13.13□□□□□ -0.31
UBE3D-207ENST00000509102 M0R2N4 97 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 GIPP09681 153 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-207ENST00000509102 CD300CQ08708 224 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 OR5I1Q13606 314 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 OR10G4Q8NGN3 311 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 OR10G9Q8NGN4 311 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 OR10G7Q8NGN6 311 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 ZNF503Q96F45 646 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 AQP10Q96PS8 301 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 ARPC5LQ9BPX5 153 aa13.12□□□□□ -0.31
UBE3D-207ENST00000509102 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
UBE3D-207ENST00000509102 CCL18P55774 89 aa13.11□□□□□ -0.31
UBE3D-207ENST00000509102 ANXA2RQ3ZCQ2 193 aa13.11□□□□□ -0.31
UBE3D-207ENST00000509102 LINC00612Q8N6U2 182 aa13.11□□□□□ -0.31
UBE3D-207ENST00000509102 HYLS1Q96M11 299 aa13.11□□□□□ -0.31
UBE3D-207ENST00000509102 OTORQ9NRC9 128 aa13.11□□□□□ -0.31
UBE3D-207ENST00000509102 IGLV2-18A0A075B6J9 118 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 TRGV2A0A075B6R0 118 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 MBP02144 154 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 RAB2AP61019 212 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 RGS21Q2M5E4 152 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 HSD17B11Q8NBQ5 300 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 Q8TAT8 98 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 GNPNAT1Q96EK6 184 aaPredicted RBP13.1□□□□□ -0.31
UBE3D-207ENST00000509102 GSN-AS1Q9NRJ2 163 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 DNAH6Q9C0G6 4158 aa13.1□□□□□ -0.31
UBE3D-207ENST00000509102 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
UBE3D-207ENST00000509102 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
UBE3D-207ENST00000509102 CDC34P49427 236 aaPredicted RBP13.09□□□□□ -0.31
UBE3D-207ENST00000509102 IBA57Q5T440 356 aaKnown RBP13.09□□□□□ -0.31
UBE3D-207ENST00000509102 OR2G3Q8NGZ4 309 aa13.09□□□□□ -0.31
UBE3D-207ENST00000509102 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
UBE3D-207ENST00000509102 TRAV26-1A0A087WT03 109 aa13.08□□□□□ -0.32
UBE3D-207ENST00000509102 TRGV1A0A0A0MS02 117 aa13.08□□□□□ -0.32
UBE3D-207ENST00000509102 PGPA6NDG6 321 aa13.08□□□□□ -0.32
UBE3D-207ENST00000509102 SERF2P84101 59 aa13.08□□□□□ -0.32
UBE3D-207ENST00000509102 Q6ZTI0 123 aa13.08□□□□□ -0.32
UBE3D-207ENST00000509102 RPH3ALQ9UNE2 315 aa13.08□□□□□ -0.32
UBE3D-207ENST00000509102 FRAS1Q86XX4 4008 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms