RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CDKN1BP46527 198 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 ZNF138P52744 262 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 GOLT1AQ6ZVE7 132 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 NDFIP1Q9BT67 221 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 TP53TG1Q9Y2A0 90 aa14.75□□□□□ -0.05
USP53-203ENST00000507597 DNAH3Q8TD57 4116 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 IGKV2-40A0A087WW87 121 aaPredicted RBP14.74□□□□□ -0.05
USP53-203ENST00000507597 C11orf94C9JXX5 98 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 IGKV2D-40P01614 121 aaPredicted RBP14.74□□□□□ -0.05
USP53-203ENST00000507597 S100A9P06702 114 aaKnown RBP14.74□□□□□ -0.05
USP53-203ENST00000507597 NMBP08949 121 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 SBSPONQ8IVN8 264 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 LYPD6BQ8NI32 183 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 RCHY1Q96PM5 261 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 AGPAT4-IT1Q9H0P7 198 aa14.74□□□□□ -0.05
USP53-203ENST00000507597 CCL20P78556 96 aa14.73□□□□□ -0.05
USP53-203ENST00000507597 ZNF492Q9P255 531 aa14.73□□□□□ -0.05
USP53-203ENST00000507597 VAX2Q9UIW0 290 aa14.73□□□□□ -0.05
USP53-203ENST00000507597 PEX7O00628 323 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 PDE6DO43924 150 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 BCL2P10415 239 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 GNG5P63218 68 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 ERCC8Q13216 396 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 AMTNQ6UX39 209 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 CCDC28AQ8IWP9 274 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 ASCL2Q99929 193 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 C20orf144Q9BQM9 153 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 GOLT1BQ9Y3E0 138 aa14.72□□□□□ -0.05
USP53-203ENST00000507597 SPRY2O43597 315 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 INSP01308 110 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 CT45A10P0DMU9 189 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 UBE2G1P62253 170 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 MEF2BQ02080 365 aaPredicted RBP14.71□□□□□ -0.05
USP53-203ENST00000507597 TMEM75Q8N9X5 138 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 IGF2BP2-AS1Q96M15 143 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 VGLL1Q99990 258 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 SLC35B3Q9H1N7 401 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 XCL2Q9UBD3 114 aa14.71□□□□□ -0.05
USP53-203ENST00000507597 AKR1C3P42330 323 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 ATP5G3P48201 142 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 SPINK13Q1W4C9 94 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 SAPCD1Q5SSQ6 148 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 RNF183Q96D59 192 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 FMC1Q96HJ9 113 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 TM2D3Q9BRN9 247 aa14.7□□□□□ -0.06
USP53-203ENST00000507597 RBFOX3A6NFN3 312 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 GPX1P07203 203 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 FXYD7P58549 80 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 FLI1Q01543 452 aaPredicted RBP14.69□□□□□ -0.06
USP53-203ENST00000507597 DEFB135Q30KP9 77 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 TMEM256Q8N2U0 113 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 TMEM208Q9BTX3 173 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 PSG8Q9UQ74 426 aa14.69□□□□□ -0.06
USP53-203ENST00000507597 M0R2Z0 102 aa14.68□□□□□ -0.06
USP53-203ENST00000507597 NDUFS6O75380 124 aaKnown RBP14.68□□□□□ -0.06
USP53-203ENST00000507597 CRISP2P16562 243 aa14.68□□□□□ -0.06
USP53-203ENST00000507597 EIF5A2Q9GZV4 153 aaKnown RBP14.68□□□□□ -0.06
USP53-203ENST00000507597 MEGF8Q7Z7M0 2845 aa14.67□□□□□ -0.06
USP53-203ENST00000507597 RARRES2Q99969 163 aa14.67□□□□□ -0.06
USP53-203ENST00000507597 NIPSNAP3BQ9BS92 247 aa14.67□□□□□ -0.06
USP53-203ENST00000507597 ZFP30Q9Y2G7 519 aa14.67□□□□□ -0.06
USP53-203ENST00000507597 LOC102723971A0A1B0GUV8 181 aa14.66□□□□□ -0.06
USP53-203ENST00000507597 PRB4P10163 310 aaPredicted RBP14.66□□□□□ -0.06
USP53-203ENST00000507597 FAM19A4Q96LR4 140 aa14.66□□□□□ -0.06
USP53-203ENST00000507597 FAM210AQ96ND0 272 aa14.66□□□□□ -0.06
USP53-203ENST00000507597 TREM1Q9NP99 234 aa14.66□□□□□ -0.06
USP53-203ENST00000507597 TRBV6-1A0A0K0K1D8 114 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 SMIM9A6NGZ8 99 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 GIG44P09565 113 aaPredicted RBP14.65□□□□□ -0.06
USP53-203ENST00000507597 TMEM183BQ1AE95 376 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 ZNF506Q5JVG8 444 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 PRNTQ86SH4 94 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 SMDT1Q9H4I9 107 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 KLF12Q9Y4X4 402 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 AGRNO00468 2067 aa14.65□□□□□ -0.06
USP53-203ENST00000507597 TRAV8-1A0A0A6YYK1 113 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 SCO2A0A1W2PP80 73 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 C7orf71A4D174 169 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 KLLNB2CW77 178 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 TAS2R60P59551 318 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 SMUG1Q53HV7 270 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 CSNK1G2-AS1Q8NCQ2 148 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 OR11H2Q8NH07 326 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 Q8TAT8 98 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 C11orf52Q96A22 123 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 OVOL2Q9BRP0 275 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 MED9Q9NWA0 146 aa14.64□□□□□ -0.07
USP53-203ENST00000507597 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 TMEM250H0YL14 139 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 H7BYZ3 331 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 J3KRW8 73 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 RNASE4P34096 147 aaKnown RBP14.63□□□□□ -0.07
USP53-203ENST00000507597 PEA15Q15121 130 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 TOR2AQ5JU69 321 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 CLLU1Q5K131 121 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 LINC01587Q99440 93 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 NEU1Q99519 415 aa14.63□□□□□ -0.07
USP53-203ENST00000507597 IGHV3OR16-12A0A075B7B8 117 aa14.62□□□□□ -0.07
USP53-203ENST00000507597 TRAV34A0A0B4J273 112 aa14.62□□□□□ -0.07
USP53-203ENST00000507597 CRXO43186 299 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms