RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 Q6ZTC4 211 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 ZNF767PQ75MW2 155 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 LYPD1Q8N2G4 141 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 ODF3Q96PU9 254 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
TCOF1-209ENST00000506630 PRM2P04554 102 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 STAG3L3P0CL85 134 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 SPART-AS1P0CW21 52 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 HTN1P15515 57 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 ZNF345Q14585 488 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 TMEM78Q5T7P6 136 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 FAM222AQ5U5X8 452 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 LGALS9CQ6DKI2 356 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 OR11H4Q8NGC9 324 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 HYLS1Q96M11 299 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 ARPC5LQ9BPX5 153 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 ACTR3CQ9C0K3 210 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-209ENST00000506630 RPH3ALQ9UNE2 315 aa9.39□□□□□ -0.91
TCOF1-209ENST00000506630 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
TCOF1-209ENST00000506630 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 C11orf94C9JXX5 98 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 FAM74A1Q5RGS3 127 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 CMTM2Q8TAZ6 248 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 VGLL1Q99990 258 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 CYTL1Q9NRR1 136 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 DKK2Q9UBU2 259 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 VPS13DQ5THJ4 4388 aa9.38□□□□□ -0.91
TCOF1-209ENST00000506630 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 PGPA6NDG6 321 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 H7BYZ3 331 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 GCHFRP30047 84 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 TAS2R60P59551 318 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 Q6ZNX1 250 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 SSX7Q7RTT5 188 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 IQCF2Q8IXL9 164 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 C2CD4CQ8TF44 421 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
TCOF1-209ENST00000506630 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 hCG_2014768A0A024R1R8 64 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 A0A0D9SG52 128 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 C7orf71A4D174 169 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 DIRC3C9JPN6 131 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 J3QL48 77 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 BCL2L11O43521 198 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 CXorf1O96002 111 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 SLC25A5P05141 298 aaKnown RBP9.36□□□□□ -0.91
TCOF1-209ENST00000506630 AZU1P20160 251 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 BTN1A1Q13410 526 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 Q8TAT8 98 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 ST6GAL2Q96JF0 529 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 FAM19A4Q96LR4 140 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 ZNF471Q9BX82 626 aaPredicted RBP9.36□□□□□ -0.91
TCOF1-209ENST00000506630 TMEM167BQ9NRX6 74 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 DNAH10Q8IVF4 4471 aa9.36□□□□□ -0.91
TCOF1-209ENST00000506630 KLLNB2CW77 178 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 IGLL5B9A064 214 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 PFDN1O60925 122 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 GPX1P07203 203 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
TCOF1-209ENST00000506630 ZNF138P52744 262 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 ZNF726P1Q15940 193 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 HERC2O95714 4834 aa9.35□□□□□ -0.91
TCOF1-209ENST00000506630 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 CRISP2P16562 243 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
TCOF1-209ENST00000506630 DAD1P61803 113 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 GNG5P63218 68 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 CD300CQ08708 224 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 GOLT1AQ6ZVE7 132 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 CCDC28AQ8IWP9 274 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
TCOF1-209ENST00000506630 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
TCOF1-209ENST00000506630 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 HTN3P15516 51 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 PRR9Q5T870 116 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 ZNF493Q6ZR52 646 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 TMUB2Q71RG4 321 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 SUN5Q8TC36 379 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 RNASE8Q8TDE3 154 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms