RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 UBE2KP61086 200 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 PSME3P61289 254 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 DIAPH2-AS1Q14236 149 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 CDK5R1Q15078 307 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 Q499Y3 187 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 MORN2Q502X0 79 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 NXNL2Q5VZ03 156 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 SSX6Q7RTT6 188 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 LEAP2Q969E1 77 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 TLCD1Q96CP7 247 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 PHB2Q99623 299 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 APOL4Q9BPW4 351 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 ZNF436Q9C0F3 470 aaPredicted RBP2.93□□□□□ -1.94
HERC4-213ENST00000506515 ALX4Q9H161 411 aaPredicted RBP2.93□□□□□ -1.94
HERC4-213ENST00000506515 C11orf68Q9H3H3 251 aaKnown RBP2.93□□□□□ -1.94
HERC4-213ENST00000506515 METTL1Q9UBP6 276 aaKnown RBP2.93□□□□□ -1.94
HERC4-213ENST00000506515 WASHC3Q9Y3C0 194 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 UFC1Q9Y3C8 167 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 R4GN34 69 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 C2orf70A6NJV1 201 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 C15orf65H3BRN8 121 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 K7EPK0 472 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 RPP14O95059 124 aaKnown RBP2.92□□□□□ -1.94
HERC4-213ENST00000506515 IGLV6-57P01721 117 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 APOA1P02647 267 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 CD7P09564 240 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 PSMB6P28072 239 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 SNRPGP62308 76 aaKnown RBP2.92□□□□□ -1.94
HERC4-213ENST00000506515 C1orf134Q5TEV5 83 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 ZNF833PQ6ZTB9 187 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 AMN1Q8IY45 258 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 ZNF664Q8N3J9 261 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 OR8A1Q8NGG7 326 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 OR8D4Q8NGM9 314 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 FBXL15Q9H469 300 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 DUSP21Q9H596 190 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 TMEM138Q9NPI0 162 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 DIABLOQ9NR28 239 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 ARMC1Q9NVT9 282 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 COA4Q9NYJ1 87 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 TVP23BQ9NYZ1 205 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 CKLFQ9UBR5 152 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 APLNQ9ULZ1 77 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
HERC4-213ENST00000506515 DNAH17Q9UFH2 4485 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 IGKV1OR2-108A0A075B7D4 117 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.91□□□□□ -1.94
HERC4-213ENST00000506515 TRBV7-1A0A0A6YYK4 115 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 LOC107986453A0A1B0GWG9 222 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 TMEM212A6NML5 194 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 ZNF736B4DX44 427 aaPredicted RBP2.91□□□□□ -1.94
HERC4-213ENST00000506515 H3BP45 60 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 SOX14O95416 240 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 HBZP02008 142 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 HTR1AP08908 422 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 PSKH1P11801 424 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 MIFP14174 115 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 SERPINB10P48595 397 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 PPP3R1P63098 170 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 MED21Q13503 144 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 RTL8BQ17RB0 113 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 VMA21Q3ZAQ7 101 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 PDZD11Q5EBL8 140 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.91□□□□□ -1.94
HERC4-213ENST00000506515 OR11H2Q8NH07 326 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 SCGB1C1Q8TD33 95 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 TNFAIP8L1Q8WVP5 186 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 ATP6V1G3Q96LB4 118 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 SLC25A31Q9H0C2 315 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 TAF9BQ9HBM6 251 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 ICOSQ9Y6W8 199 aa2.91□□□□□ -1.94
HERC4-213ENST00000506515 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
HERC4-213ENST00000506515 DMBT1Q9UGM3 2413 aaPredicted RBP2.9□□□□□ -1.94
HERC4-213ENST00000506515 DNAH11Q96DT5 4516 aa2.9□□□□□ -1.94
HERC4-213ENST00000506515 IGKV1-9A0A0C4DH69 117 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 A0A1B0GXF2 115 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 H3BQ85 93 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 K7ERS5 55 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 DCTN3O75935 186 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 CA2P00918 260 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 P0C880 135 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 C8orf88P0DMB2 117 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 ZNF93P35789 620 aaPredicted RBP2.9□□□□□ -1.95
HERC4-213ENST00000506515 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 RHOGP84095 191 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 DEFB135Q30KP9 77 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 DHFR2Q86XF0 187 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 UBE2DNLQ8IWF7 75 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 TTC9CQ8N5M4 171 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 ZNF439Q8NDP4 499 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 GRPEL2Q8TAA5 225 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 VSTM2AQ8TAG5 236 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 ADAT3Q96EY9 351 aaPredicted RBP2.9□□□□□ -1.95
HERC4-213ENST00000506515 LINC01587Q99440 93 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 GNG8Q9UK08 70 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 C14orf166Q9Y224 244 aaKnown RBP2.9□□□□□ -1.95
HERC4-213ENST00000506515 TRAPPC1Q9Y5R8 145 aa2.9□□□□□ -1.95
HERC4-213ENST00000506515 IGKV1-12A0A0C4DH73 117 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms