RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.42□□□□□ -1.7
SCLT1-207ENST00000506233 HIVEP1P15822 2718 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 FLNAP21333 2647 aaKnown RBP4.41□□□□□ -1.7
SCLT1-207ENST00000506233 ABCA12Q86UK0 2595 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 PDE6DO43924 150 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 HBE1P02100 147 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 TMEM183BQ1AE95 376 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 TMEM241Q24JQ0 296 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 MINOS1Q5TGZ0 78 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 FAM231DQ6ZW35 169 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 RPUSD4Q96CM3 377 aaKnown RBP4.41□□□□□ -1.7
SCLT1-207ENST00000506233 RNF2Q99496 336 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 NIPSNAP3BQ9BS92 247 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 DYNLRB1Q9NP97 96 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 NAGKQ9UJ70 344 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 MINOS1-NBL1R4GNA1 71 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 NACAE9PAV3 2078 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 TRAV8-1A0A0A6YYK1 113 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 IGLV9-49A0A0B4J1Y8 123 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 AMBPP02760 352 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 BLCAPP62952 87 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 CENPWQ5EE01 88 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 ZC2HC1AQ96GY0 325 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 FKBP11Q9NYL4 201 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 TBL2Q9Y4P3 447 aaKnown RBP4.41□□□□□ -1.7
SCLT1-207ENST00000506233 NSD1Q96L73 2696 aaPredicted RBP4.41□□□□□ -1.7
SCLT1-207ENST00000506233 NPFFO15130 113 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 C8orf88P0DMB2 117 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 HTR1DP28221 377 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 PROK1P58294 105 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 SAPCD1Q5SSQ6 148 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 BRD3OSQ6XYD6 125 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 TMEM183AQ8IXX5 376 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 PBDC1Q9BVG4 233 aa4.41□□□□□ -1.7
SCLT1-207ENST00000506233 PIGBOS1A0A0B4J2F0 54 aa4.4□□□□□ -1.7
SCLT1-207ENST00000506233 IGHV3-23P01764 117 aa4.4□□□□□ -1.7
SCLT1-207ENST00000506233 RPL27AP46776 148 aaKnown RBP4.4□□□□□ -1.7
SCLT1-207ENST00000506233 FABP9Q0Z7S8 132 aa4.4□□□□□ -1.7
SCLT1-207ENST00000506233 NBASA2RRP1 2371 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 IGHV1-69DA0A0B4J2H0 117 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 BUB3O43684 328 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 IGHV1-69P01742 117 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 GZMBP10144 247 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 RAB4BP61018 213 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 RIGQ13278 110 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 LINC00336Q6ZUF6 198 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 Q8N2B8 174 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 SCGB1C1Q8TD33 95 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 MRPL32Q9BYC8 188 aaKnown RBP4.4□□□□□ -1.71
SCLT1-207ENST00000506233 LRRK2Q5S007 2527 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 HYDINQ4G0P3 5121 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 BMPR1BO00238 502 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 CYB5BO43169 146 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 PSMB8P28062 276 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 APRG1Q8IVJ8 170 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 C11orf45Q8TAV5 145 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.71
SCLT1-207ENST00000506233 AMMECR1Q9Y4X0 333 aaPredicted RBP4.4□□□□□ -1.71
SCLT1-207ENST00000506233 S100GP29377 79 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 C8orf49Q96NF6 230 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 C19orf24Q9BVV8 132 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 TNFRSF19Q9NS68 423 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 FAM231BA6NCW3 169 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 IGHG2P01859 326 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 ERVK-16P61578 105 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 FXYD3Q14802 87 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 AKIRIN2Q53H80 203 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 MAPK1IP1LQ8NDC0 245 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 FAM210BQ96KR6 192 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 ESM1Q9NQ30 184 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 ZC4H2Q9NQZ6 224 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 IL36BQ9NZH7 164 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 EPDR1Q9UM22 224 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 PKD1P98161 4303 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 OOSP1A8MZH6 123 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 TCRAP04437 139 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 RHOBP62745 196 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCLT1-207ENST00000506233 Q86TA4 180 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 NIT1Q86X76 327 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 VSTM2AQ8TAG5 236 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 RPEQ96AT9 228 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 ACY3Q96HD9 319 aa4.39□□□□□ -1.71
SCLT1-207ENST00000506233 LINC00587B1AMM8 73 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 C17orf112F2Z3M2 114 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 F6UZH7 168 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 CLDN34H7C241 214 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 IFNA4P05014 189 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 SRP14P37108 136 aaKnown RBP4.38□□□□□ -1.71
SCLT1-207ENST00000506233 KRTAP10-3P60369 221 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 NUP35Q8NFH5 326 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 SPATA3Q8NHX4 192 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 NOL4LQ96MY1 436 aaPredicted RBP4.38□□□□□ -1.71
SCLT1-207ENST00000506233 ZNF702PQ9H963 129 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms