RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 TSPOP30536 169 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 LEPP41159 167 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 CDKN1BP46527 198 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 RAB14P61106 215 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 CCL20P78556 96 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 SPINK13Q1W4C9 94 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 DEFB135Q30KP9 77 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 SGK494Q96LW2 274 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 RCHY1Q96PM5 261 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 VGLL1Q99990 258 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 SPATA25Q9BR10 227 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 TMEM208Q9BTX3 173 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 EPDR1Q9UM22 224 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 MGAM2Q2M2H8 2515 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 TRAV12-2A0A075B6T6 113 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 NPIPB6E9PJ23 425 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 SPRY2O43597 315 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 AMBPP02760 352 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 NHLRC4P0CG21 123 aaPredicted RBP6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 CT45A10P0DMU9 189 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 ATP5G3P48201 142 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 UBE2G1P62253 170 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 C9orf47Q6ZRZ4 202 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 ARL6IP6Q8N6S5 226 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 CYB561D1Q8N8Q1 229 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 PCNPQ8WW12 178 aaKnown RBP6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 HIST1H2BAQ96A08 127 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 CLUHP3Q96NS8 147 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 ATG101Q9BSB4 218 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 AGPAT4-IT1Q9H0P7 198 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
LIMCH1-206ENST00000505705 PEX7O00628 323 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 INSP01308 110 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 GPX1P07203 203 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 TAGLN2P37802 199 aaKnown RBP6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 AKR1C3P42330 323 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 ZNF138P52744 262 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 Q6ZWC4 215 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 PRNTQ86SH4 94 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 Q8TAT8 98 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 RARRES2Q99969 163 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 TXNDC17Q9BRA2 123 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 TCEAL7Q9BRU2 100 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 EIF5A2Q9GZV4 153 aaKnown RBP6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 RETNQ9HD89 108 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 ZNF492Q9P255 531 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 VAX2Q9UIW0 290 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 PSG8Q9UQ74 426 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 GOLT1BQ9Y3E0 138 aa6.01□□□□□ -1.45
LIMCH1-206ENST00000505705 TRAV8-1A0A0A6YYK1 113 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 TRAV34A0A0B4J273 112 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 RBFOX3A6NFN3 312 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 A8MTW9 85 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 BCL2P10415 239 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 HTN1P15515 57 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 RNASE4P34096 147 aaKnown RBP6□□□□□ -1.45
LIMCH1-206ENST00000505705 FLI1Q01543 452 aaPredicted RBP6□□□□□ -1.45
LIMCH1-206ENST00000505705 AMTNQ6UX39 209 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 ZNF767PQ75MW2 155 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 CCDC28AQ8IWP9 274 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 TMEM75Q8N9X5 138 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 OR11H2Q8NH07 326 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 RNF183Q96D59 192 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 IGF2BP2-AS1Q96M15 143 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 LINC00479Q96M42 142 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 ODF3Q96PU9 254 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 LINC01587Q99440 93 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 TM2D3Q9BRN9 247 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 NIPSNAP3BQ9BS92 247 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 TREM1Q9NP99 234 aa6□□□□□ -1.45
LIMCH1-206ENST00000505705 TRAV12-3A0A0B4J271 114 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 SCO2A0A1W2PP80 73 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 FBLL1A6NHQ2 334 aaKnown RBP5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 PDE6DO43924 150 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 GIG44P09565 113 aaPredicted RBP5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 CEBPGP53567 150 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 MEF2BQ02080 365 aaPredicted RBP5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 TOR2AQ5JU69 321 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 SAPCD1Q5SSQ6 148 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 LYPD6BQ8NI32 183 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 FMC1Q96HJ9 113 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 OVOL2Q9BRP0 275 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 MED9Q9NWA0 146 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 TP53TG1Q9Y2A0 90 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 LENEPQ9Y5L5 61 aa5.99□□□□□ -1.45
LIMCH1-206ENST00000505705 AGRNO00468 2067 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 TRBV7-9A0A0J9YWB2 115 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 LOC102723971A0A1B0GUV8 181 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 C7orf71A4D174 169 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 RGS13O14921 159 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 CRXO43186 299 aaPredicted RBP5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 S100A9P06702 114 aaKnown RBP5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 NMBP08949 121 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 BTN1A1Q13410 526 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 PMS2P11Q13670 270 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 KIR3DS1Q14943 382 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 SMUG1Q53HV7 270 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 GFI1BQ5VTD9 330 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 TMEM256Q8N2U0 113 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms