RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 Q6ZS92 163 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 HIST1H2BAQ96A08 127 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 ATG2AQ2TAZ0 1938 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 RAI1Q7Z5J4 1906 aaPredicted RBP4.17□□□□□ -1.74
MATR3-211ENST00000505625 TRAV26-2A0A0B4J265 109 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 HLA-DRB4P13762 266 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 CTAG1AP78358 180 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 SERF2P84101 59 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TEX36Q5VZQ5 186 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 Q6ZWC4 215 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TMEM242Q9NWH2 141 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 HLA-DRB4X5D2U9 266 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1D-37A0A075B6S9 117 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 NTN3O00634 580 aaPredicted RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 RS1O15537 224 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 WBP1Q96G27 269 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 IMMP2LQ96T52 175 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 KLK12Q9UKR0 248 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 DENND4CQ5VZ89 1909 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 DOPEY2Q9Y3R5 2298 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 ANAPC1Q9H1A4 1944 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 IGLV3-9A0A075B6K5 115 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 NANOS3P60323 173 aaKnown RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 SNRPEP62304 92 aaKnown RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 C14orf144Q96I85 54 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 DNAJC30Q96LL9 226 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 IGLV5-52A0A0A0MRZ9 124 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 NDUFB8O95169 186 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 PFN1P07737 140 aaKnown RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 FAM210AQ96ND0 272 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 HS3ST6Q96QI5 342 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 AKAP6Q13023 2319 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 PCDH15Q96QU1 1955 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 DPM2O94777 84 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 IGKCP01834 107 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 IGHG4P01861 327 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 ATP5G1P05496 136 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 STAG3L3P0CL85 134 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 WT1P19544 449 aaPredicted RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 ATP5G3P48201 142 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 ERG28Q9UKR5 140 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 LY96Q9Y6Y9 160 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 C4orf51C9J302 202 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 INAFM2P0DMQ5 153 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 PRTN3P24158 256 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 LINC00205P59089 165 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 SLC25A48Q6ZT89 311 aaKnown RBP4.16□□□□□ -1.74
MATR3-211ENST00000505625 LINC00482Q8N8I6 264 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 TPSG1Q9NRR2 321 aa4.16□□□□□ -1.74
MATR3-211ENST00000505625 SLAQ13239 276 aa4.15□□□□□ -1.74
MATR3-211ENST00000505625 GFI1Q99684 422 aa4.15□□□□□ -1.74
MATR3-211ENST00000505625 EML6Q6ZMW3 1958 aa4.15□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1D-43A0A0B4J1Z2 117 aa4.15□□□□□ -1.74
MATR3-211ENST00000505625 FAM19A5Q7Z5A7 132 aaPredicted RBP4.15□□□□□ -1.74
MATR3-211ENST00000505625 WFDC9Q8NEX5 89 aa4.15□□□□□ -1.74
MATR3-211ENST00000505625 DUTP33316 252 aaKnown RBP4.15□□□□□ -1.74
MATR3-211ENST00000505625 C21orf62-AS1Q17RA5 79 aa4.15□□□□□ -1.74
MATR3-211ENST00000505625 TRPT1Q86TN4 253 aaKnown RBP4.15□□□□□ -1.74
MATR3-211ENST00000505625 IGKV2D-26A0A0A0MRZ7 120 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 IGKV1-9A0A0C4DH69 117 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 EFNB3Q15768 340 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 PRORYQ9H606 182 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 MYMXA0A1B0GTQ4 84 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 YPEL1O60688 119 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 SEC11AP67812 179 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 ZNF345Q14585 488 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 C14orf177Q52M58 125 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 ZNF497Q6ZNH5 498 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 ATP5L2Q7Z4Y8 100 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 C16orf74Q96GX8 76 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 YPEL2Q96QA6 119 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 EPDR1Q9UM22 224 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 NUP210LQ5VU65 1888 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 F5P12259 2224 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 C1QCP02747 245 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 Q8N9W7 124 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.75
MATR3-211ENST00000505625 NDUFA4O00483 81 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 HIGD2AQ9BW72 106 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
MATR3-211ENST00000505625 TRIOBPQ9H2D6 2365 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 F2Z2F3 143 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 H0YJW9 148 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 RBM3P98179 157 aaKnown RBP4.14□□□□□ -1.75
MATR3-211ENST00000505625 FHL1Q13642 323 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 RHOHQ15669 191 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 WIPF2Q8TF74 440 aaPredicted RBP4.14□□□□□ -1.75
MATR3-211ENST00000505625 PPDPFQ9H3Y8 114 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 ZNF407Q9C0G0 2248 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 AGAP20933 346 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.14□□□□□ -1.75
MATR3-211ENST00000505625 FNDC4Q9H6D8 234 aaPredicted RBP4.14□□□□□ -1.75
MATR3-211ENST00000505625 I3L3M4 83 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 NHLRC3Q5JS37 347 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 NDUFA11Q86Y39 141 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 OBSL1O75147 1896 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 IGHV1OR15-1A0A075B7D0 117 aa4.14□□□□□ -1.75
MATR3-211ENST00000505625 TRAV8-1A0A0A6YYK1 113 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms