RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 COL6A6A6NMZ7 2263 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 OR2T8A6NH00 312 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LY6LH3BQJ8 138 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TAX1BP3O14907 124 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 MRPS12O15235 138 aaKnown RBP5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HLA-DRB1P01911 266 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PRB1P04280 392 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HLA-DMBP28068 263 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 VAMP3Q15836 100 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 BVES-AS1Q5T3Y7 98 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF414Q96IQ9 312 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 MAP1LC3CQ9BXW4 147 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SCRT2Q9NQ03 307 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TMEM14CQ9P0S9 112 aa5.13□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NBPF19A0A087WUL8 3843 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGKV2-40A0A087WW87 121 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NPIPB5A8MRT5 1133 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SMKR1H3BMG3 65 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 H3BRN7 92 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGKV2D-40P01614 121 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CLEC3BP05452 202 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RELQ04864 619 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CDSNQ15517 529 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PSG3Q16557 428 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SLC25A34Q6PIV7 304 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LYZL1Q6UWQ5 148 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 BPIFA4PQ86YQ2 179 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 AMN1Q8IY45 258 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 Q96MF0 132 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ST20Q9HBF5 79 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 C1RLQ9NZP8 487 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SOX21Q9Y651 276 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 MYO18BQ8IUG5 2567 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CELSR1Q9NYQ6 3014 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 A0A096LNJ9 63 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PAX4O43316 350 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LIPFP07098 398 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 OR5AL1P0C617 328 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HES1Q14469 280 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 OR8A1Q8NGG7 326 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PRSS3P2Q8NHM4 247 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 Q8TAT8 98 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 BEX4Q9NWD9 120 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RNF24Q9Y225 148 aa5.12□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 D6R8Y8 96 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 GAS8-AS1O95177 125 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RBX1P62877 108 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NDPQ00604 133 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RIGQ13278 110 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF672Q499Z4 452 aaPredicted RBP5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 DYNAPQ8N1N2 210 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TMEM75Q8N9X5 138 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF747Q9BV97 191 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 VPS13CQ709C8 3753 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGHV2-70DA0A0C4DH43 119 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 FAM231BA6NCW3 169 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SH2D1AO60880 128 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF80P51504 273 aaPredicted RBP5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PAX2Q02962 417 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 FAM162BQ5T6X4 162 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 LINC01545Q5VT33 79 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 AMMECR1LQ6DCA0 310 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TNFRSF14Q92956 283 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PPP1R14DQ9NXH3 145 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SIGLEC8Q9NYZ4 499 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 CBY1Q9Y3M2 126 aa5.11□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 UTP20O75691 2785 aaKnown RBP5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 WNK2Q9Y3S1 2297 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 WI2-2373I1.2A0A1W2PRP0 233 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HSBP1L1C9JCN9 74 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NBR2O15453 112 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 GNG7O60262 68 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 UQCRFS1P47985 274 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 C2orf91Q6ZV80 131 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 FA2HQ7L5A8 372 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 OR4C5Q8NGB2 326 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 VGLL1Q99990 258 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 MSRB1Q9NZV6 116 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 HSPB8Q9UJY1 196 aa5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 USP9XQ93008 2570 aaPredicted RBP5.1□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TRAV8-6A0A0B4J262 113 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 NCBP2LA6PVI3 153 aaKnown RBP5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 EGR2P11161 476 aaPredicted RBP5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ARL3P36405 182 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PRSS57Q6UWY2 283 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ZNF843Q8N446 348 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 SMAD5-AS1Q9Y6J3 95 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 TMEM189A5PLL7 270 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 IGHG4P01861 327 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 RHOGP84095 191 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 ERCC8Q13216 396 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 MRPL51Q4U2R6 128 aaKnown RBP5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 DEFB125Q8N687 156 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 PRELID3AQ96N28 172 aa5.09□□□□□ -1.59
NPHP3-AS1-202ENST00000504440 DPM3Q9P2X0 92 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms