RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 MDFICQ9P1T7 246 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 IGHV3-43A0A0B4J1X8 118 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 IGHV3-43DP0DP04 118 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 ERCC8Q13216 396 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 TCF20Q9UGU0 1960 aaKnown RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 SH2D6Q7Z4S9 175 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 TMEM133Q9H2Q1 129 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 CSDC2Q9Y534 153 aaKnown RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 PI4KAP42356 2102 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 RNASE2P10153 161 aaKnown RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 UBE2AP49459 152 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 PIK3CD-AS1Q5SR53 167 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 NTN5Q8WTR8 489 aaPredicted RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 PCNX2A6NKB5 2137 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 SNAI2O43623 268 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 FOXE3Q13461 319 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 FANCD2OSQ96PS1 177 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 NXPH4O95158 308 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 RPL36AP83881 106 aaKnown RBP4.87□□□□□ -1.63
LINC02397-201ENST00000504409 ODF1Q14990 250 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 GUSBP11Q6P575 273 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 ZNF833PQ6ZTB9 187 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 RPL36ALQ969Q0 106 aaKnown RBP4.87□□□□□ -1.63
LINC02397-201ENST00000504409 IGHV5-51A0A0C4DH38 117 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 RCHY1Q96PM5 261 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 ODF3Q96PU9 254 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 PRR25Q96S07 402 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 MRPL35Q9NZE8 188 aaKnown RBP4.87□□□□□ -1.63
LINC02397-201ENST00000504409 SLC25A29Q8N8R3 303 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 SPRY4Q9C004 299 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 JPT2Q9H910 190 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 COX7A2LO14548 114 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 SPRY3O43610 288 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 FXYD5Q96DB9 178 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 LYPD6Q86Y78 171 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 CLUHP3Q96NS8 147 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 DAZ1Q9NQZ3 744 aaKnown RBP4.87□□□□□ -1.63
LINC02397-201ENST00000504409 CEP192Q8TEP8 1941 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 ZNF883P0CG24 379 aa4.87□□□□□ -1.63
LINC02397-201ENST00000504409 TMSB15BA0A087X1C1 80 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 A0A0J9YW62 118 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 CFHR1Q03591 330 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 NDUFA12Q9UI09 145 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 FHL1Q13642 323 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 C2orf16Q68DN1 1984 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 KRTAP27-1Q3LI81 207 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 CNFNQ9BYD5 112 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 C16orf97H3BN30 126 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 BLCAPP62952 87 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 PRIMA1Q86XR5 153 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 LOXL1Q08397 574 aaPredicted RBP4.86□□□□□ -1.63
LINC02397-201ENST00000504409 PCOLCEQ15113 449 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 C5orf24Q7Z6I8 188 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 JMJD8Q96S16 334 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 SPEM2Q0P670 501 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 RS1O15537 224 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 TTTY12Q9BZ98 90 aa4.86□□□□□ -1.63
LINC02397-201ENST00000504409 CD7P09564 240 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 TP53TG1Q9Y2A0 90 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 K7EN84 100 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
LINC02397-201ENST00000504409 F5P12259 2224 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 PROP1O75360 226 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 ARMS2P0C7Q2 107 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 LYZL4Q96KX0 146 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 IGHV3-15A0A0B4J1V0 119 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 IGHV3-13P01766 116 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 GATA2P23769 480 aaPredicted RBP4.85□□□□□ -1.63
LINC02397-201ENST00000504409 CXCL6P80162 114 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 SS18Q15532 418 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 ZFP2Q6ZN57 461 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 MIAQ16674 131 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 ASPHD1Q5U4P2 390 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 ZNF784Q8NCA9 323 aaPredicted RBP4.85□□□□□ -1.63
LINC02397-201ENST00000504409 C6orf226Q5I0X4 101 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 K7ENP7 123 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 ALPK2Q86TB3 2170 aa4.85□□□□□ -1.63
LINC02397-201ENST00000504409 C19orf71A6NCJ1 209 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 FAM219BQ5XKK7 198 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 BADQ92934 168 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 LOC101059948A0A1B0GTJ6 334 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 ESM1Q9NQ30 184 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 E9PLN8 166 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 SAP30O75446 220 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 KLK15Q9H2R5 256 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 FSTL3O95633 263 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 INSP01308 110 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 UBE2D3P61077 147 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 UBE2D2P62837 147 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 DEPPQ9NTK1 212 aa4.84□□□□□ -1.63
LINC02397-201ENST00000504409 ADARB2-AS1A8MUL3 147 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 FOXF2Q12947 444 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 NSUN5P1Q3KNT7 163 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 HIST2H2BDQ6DRA6 164 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 IGFBP4P22692 258 aa4.84□□□□□ -1.64
LINC02397-201ENST00000504409 PRR31Q5SQ13 230 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms