RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 SMCPP49901 116 aaPredicted RBP4.86□□□□□ -1.63
COPB2-204ENST00000504295 FABP6P51161 128 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 TNFAIP6P98066 277 aaPredicted RBP4.86□□□□□ -1.63
COPB2-204ENST00000504295 BSPH1Q075Z2 132 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 FHL3Q13643 280 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 C12orf54Q6X4T0 127 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
COPB2-204ENST00000504295 DTX2Q86UW9 622 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 DYNAPQ8N1N2 210 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 C8orf49Q96NF6 230 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 GNG12Q9UBI6 72 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 FASNP49327 2511 aaKnown RBP4.86□□□□□ -1.63
COPB2-204ENST00000504295 PCNX1Q96RV3 2341 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
COPB2-204ENST00000504295 OOSP1A8MZH6 123 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 B9A039 149 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 DSCR9P59020 149 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 HSD52Q0P140 79 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 PPP1R27Q86WC6 154 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 TMEM158Q8WZ71 300 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 PSG8Q9UQ74 426 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 DOPEY2Q9Y3R5 2298 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 A0A1W2PPM0 123 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 TSHBP01222 138 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 HNF1AP20823 631 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 KRTDAPP60985 99 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 SLC25A34Q6PIV7 304 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 ATP6V0E2Q8NHE4 81 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 CCL19Q99731 98 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 RNF24Q9Y225 148 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 LENEPQ9Y5L5 61 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 CR1P17927 2039 aa4.86□□□□□ -1.63
COPB2-204ENST00000504295 CELSR2Q9HCU4 2923 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 UBR5O95071 2799 aaPredicted RBP4.85□□□□□ -1.63
COPB2-204ENST00000504295 M0R381 172 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 SH2D1AO60880 128 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 GPR183P32249 361 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 NEXN-AS1Q8NBZ9 246 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 OR4X2Q8NGF9 303 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 CCDC140Q96MF4 163 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 FOXC2Q99958 501 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 SPANXB1Q9NS25 103 aaPredicted RBP4.85□□□□□ -1.63
COPB2-204ENST00000504295 HIF1ANQ9NWT6 349 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 CFAP46Q8IYW2 2715 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 ICE1Q9Y2F5 2266 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 SPTBN1Q01082 2364 aaKnown RBP4.85□□□□□ -1.63
COPB2-204ENST00000504295 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 ACTL6BO94805 426 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 CD7P09564 240 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 MYOZ3Q8TDC0 251 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 HSPB8Q9UJY1 196 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 IGHV4OR15-8A0A075B7B6 117 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 A0A087WW49 117 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 TCF21O43680 179 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 COX7A2P2O60397 106 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 LEPROTL1O95214 131 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
COPB2-204ENST00000504295 ERHP84090 104 aaKnown RBP4.85□□□□□ -1.63
COPB2-204ENST00000504295 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 RAB1BQ9H0U4 201 aa4.85□□□□□ -1.63
COPB2-204ENST00000504295 NPYP01303 97 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 TCL1AP56279 114 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 ERCC8Q13216 396 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 EDDM3AQ14507 147 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 HIGD1AQ9Y241 93 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 CRYBG3Q68DQ2 2970 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 ZNF705FA8MVS1 300 aaPredicted RBP4.84□□□□□ -1.63
COPB2-204ENST00000504295 BUB3O43684 328 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 ZNF705DP0CH99 300 aaPredicted RBP4.84□□□□□ -1.63
COPB2-204ENST00000504295 ZNF705BP0CI00 300 aaPredicted RBP4.84□□□□□ -1.63
COPB2-204ENST00000504295 FCER1GP30273 86 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 GNG10P50151 68 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 SLC35B1P78383 322 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 DEFB113Q30KQ7 82 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 EXOC3-AS1Q8N2X6 119 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 Q8N8P6 123 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 SRSF12Q8WXF0 261 aaKnown RBP4.84□□□□□ -1.63
COPB2-204ENST00000504295 PTH2Q96A98 100 aa4.84□□□□□ -1.63
COPB2-204ENST00000504295 CSMD2Q7Z408 3487 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 HELZ2Q9BYK8 2649 aaKnown RBP4.84□□□□□ -1.64
COPB2-204ENST00000504295 TRAV8-1A0A0A6YYK1 113 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 PRSS29PA6NIE9 313 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 APOA2P02652 100 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 TMEM11P17152 192 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 FER1L6-AS1Q8NA97 138 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 TOMM6Q96B49 74 aa4.84□□□□□ -1.64
COPB2-204ENST00000504295 PEF1Q9UBV8 284 aaKnown RBP4.84□□□□□ -1.64
COPB2-204ENST00000504295 ZNF256Q9Y2P7 627 aaPredicted RBP4.84□□□□□ -1.64
COPB2-204ENST00000504295 IGHV7-81A0A0B4J1V7 117 aa4.83□□□□□ -1.64
COPB2-204ENST00000504295 TNFRSF1AP19438 455 aa4.83□□□□□ -1.64
COPB2-204ENST00000504295 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
COPB2-204ENST00000504295 SUB1P53999 127 aaKnown RBP eCLIP4.83□□□□□ -1.64
COPB2-204ENST00000504295 PRR9Q5T870 116 aa4.83□□□□□ -1.64
COPB2-204ENST00000504295 Q8N9W7 124 aa4.83□□□□□ -1.64
COPB2-204ENST00000504295 GLMPQ8WWB7 406 aa4.83□□□□□ -1.64
COPB2-204ENST00000504295 DYNLRB1Q9NP97 96 aa4.83□□□□□ -1.64
COPB2-204ENST00000504295 SLC25A17O43808 307 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms