RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 LOC102724200A0A096LPH7 203 aaPredicted RBP7.51□□□□□ -1.21
COL1A1-210ENST00000504289 IGHV3-35A0A0C4DH35 117 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 F2Z2F3 143 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 OVOL1O14753 267 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 SH2D1AO60880 128 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
COL1A1-210ENST00000504289 CAMPP49913 170 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 ZNF138P52744 262 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 LINC00310P59036 64 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 TMEM78Q5T7P6 136 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 GDF5OSQ5U4N7 250 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 RNF152Q8N8N0 203 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 CHCHD1Q96BP2 118 aaKnown RBP7.51□□□□□ -1.21
COL1A1-210ENST00000504289 LINC00477Q96M19 166 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 UFC1Q9Y3C8 167 aa7.51□□□□□ -1.21
COL1A1-210ENST00000504289 UTP20O75691 2785 aaKnown RBP7.5□□□□□ -1.21
COL1A1-210ENST00000504289 IGKV2-40A0A087WW87 121 aaPredicted RBP7.5□□□□□ -1.21
COL1A1-210ENST00000504289 TRAV8-2A0A0B4J237 113 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 IGHV7-4-1A0A0J9YVY3 117 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 TSTD3H0UI37 97 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 ZNF324O75467 553 aaPredicted RBP7.5□□□□□ -1.21
COL1A1-210ENST00000504289 IGKV2D-40P01614 121 aaPredicted RBP7.5□□□□□ -1.21
COL1A1-210ENST00000504289 CTRLP40313 264 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 Q8N2B8 174 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 PSMG3-AS1Q96PY0 264 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 VGLL1Q99990 258 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 LINC00527Q9UJ94 153 aa7.5□□□□□ -1.21
COL1A1-210ENST00000504289 CENPEQ02224 2701 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 NUPR1O60356 82 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 OR5AL1P0C617 328 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 IGLC6P0CF74 106 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 KRTAP10-9P60411 292 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 KIAA1644Q3SXP7 199 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 C16orf92Q96LL3 132 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 Q96MF0 132 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 C8orf49Q96NF6 230 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 KLK15Q9H2R5 256 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 NRN1Q9NPD7 142 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 SMPXQ9UHP9 88 aa7.49□□□□□ -1.21
COL1A1-210ENST00000504289 TEP1Q99973 2627 aaKnown RBP7.49□□□□□ -1.21
COL1A1-210ENST00000504289 CELSR2Q9HCU4 2923 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 MYO9AB2RTY4 2548 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 LGALS9O00182 355 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 SOCS3O14543 225 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 ID1P41134 155 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 REC114Q7Z4M0 266 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 FER1L6-AS1Q8NA97 138 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 UBE2E2Q96LR5 201 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 AGPAT4-IT1Q9H0P7 198 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 NAGKQ9UJ70 344 aa7.48□□□□□ -1.21
COL1A1-210ENST00000504289 MAP1AP78559 2803 aaPredicted RBP7.47□□□□□ -1.21
COL1A1-210ENST00000504289 CR1P17927 2039 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 NBPF19A0A087WUL8 3843 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 ABCA12Q86UK0 2595 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 FBN2P35556 2912 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 IGHV3OR16-8A0A075B7F1 116 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 A0A1B0GUS0 222 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 ZNF705FA8MVS1 300 aaPredicted RBP7.47□□□□□ -1.21
COL1A1-210ENST00000504289 HSBP1O75506 76 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 SCGB1D1O95968 90 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 TRBV12-3P01733 135 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 PPBPP02775 128 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 LGALS1P09382 135 aaKnown RBP7.47□□□□□ -1.21
COL1A1-210ENST00000504289 ARMS2P0C7Q2 107 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 HLA-DMBP28068 263 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 AMTP48728 403 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 LYZL1Q6UWQ5 148 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 UNQ9165/PRO28630Q6UXU0 137 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 Q6ZS46 218 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 OR10J6PQ8NGY7 276 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 RHPN1-AS1Q9BWJ2 59 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 U3KQK5 164 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 POLQO75417 2590 aa7.47□□□□□ -1.21
COL1A1-210ENST00000504289 IGHV3-66A0A0C4DH42 116 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 SMAD7O15105 426 aaKnown RBP7.46□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF207O43670 478 aaKnown RBP7.46□□□□□ -1.22
COL1A1-210ENST00000504289 IGHV3-11P01762 117 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.22
COL1A1-210ENST00000504289 FAM104BQ5XKR9 115 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 IL17RELQ6ZVW7 336 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 Q6ZWC4 215 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 NIT1Q86X76 327 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 APRG1Q8IVJ8 170 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 RNF182Q8N6D2 247 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF738Q8NE65 137 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 RCHY1Q96PM5 261 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
COL1A1-210ENST00000504289 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF702PQ9H963 129 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
COL1A1-210ENST00000504289 ITPR2Q14571 2701 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms