RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 MAP1LC3B2A6NCE7 125 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 UMAD1C9J7I0 102 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 TSPOP30536 169 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 LEPP41159 167 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
SMAD1-204ENST00000503324 ZFP69Q49AA0 526 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 MAP1LC3BQ9GZQ8 125 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 TMPRSS5Q9H3S3 457 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 ZNF492Q9P255 531 aa12.77□□□□□ -0.37
SMAD1-204ENST00000503324 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
SMAD1-204ENST00000503324 SLC25A5P05141 298 aaKnown RBP12.76□□□□□ -0.37
SMAD1-204ENST00000503324 FAM74A1Q5RGS3 127 aa12.76□□□□□ -0.37
SMAD1-204ENST00000503324 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
SMAD1-204ENST00000503324 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
SMAD1-204ENST00000503324 ZFAND6Q6FIF0 208 aa12.76□□□□□ -0.37
SMAD1-204ENST00000503324 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 KLLNB2CW77 178 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 GGTLC3B5MD39 225 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 J3KRW8 73 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 PRM2P04554 102 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 CRISP2P16562 243 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 Q8TAT8 98 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 FAM213BQ8TBF2 198 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 TMEM208Q9BTX3 173 aa12.75□□□□□ -0.37
SMAD1-204ENST00000503324 A0A1W2PRE2 83 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 HBE1P02100 147 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 ZNF138P52744 262 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 GNG5P63218 68 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 SLC51BQ86UW2 128 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 MBD3L1Q8WWY6 194 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
SMAD1-204ENST00000503324 YTHDF2Q9Y5A9 579 aaKnown RBP12.74□□□□□ -0.37
SMAD1-204ENST00000503324 ZNF705GA8MUZ8 300 aaPredicted RBP12.73□□□□□ -0.37
SMAD1-204ENST00000503324 NMBP08949 121 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
SMAD1-204ENST00000503324 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 PRR9Q5T870 116 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 GOLT1AQ6ZVE7 132 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 LINC01587Q99440 93 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 CELA1Q9UNI1 258 aa12.73□□□□□ -0.37
SMAD1-204ENST00000503324 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
SMAD1-204ENST00000503324 TRBV7-9A0A0J9YWB2 115 aa12.72□□□□□ -0.37
SMAD1-204ENST00000503324 LOC102723971A0A1B0GUV8 181 aa12.72□□□□□ -0.37
SMAD1-204ENST00000503324 C7orf71A4D174 169 aa12.72□□□□□ -0.37
SMAD1-204ENST00000503324 NANOS2P60321 138 aaKnown RBP12.72□□□□□ -0.37
SMAD1-204ENST00000503324 DYNC2H1Q8NCM8 4307 aaKnown RBP12.72□□□□□ -0.37
SMAD1-204ENST00000503324 TMEM189A5PLL7 270 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 FAM74A7A6NL05 159 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 H7BYZ3 331 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 TCRAP04437 139 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 AZU1P20160 251 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.37
SMAD1-204ENST00000503324 TAS2R60P59551 318 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 UBE2G2P60604 165 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 BTN1A1Q13410 526 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 EIF5AL1Q6IS14 154 aaKnown RBP12.71□□□□□ -0.37
SMAD1-204ENST00000503324 SFT2D1Q8WV19 159 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 EPDR1Q9UM22 224 aa12.71□□□□□ -0.37
SMAD1-204ENST00000503324 TRAV8-1A0A0A6YYK1 113 aa12.7□□□□□ -0.38
SMAD1-204ENST00000503324 PLAC8L1A1L4L8 177 aa12.7□□□□□ -0.38
SMAD1-204ENST00000503324 ZNF324O75467 553 aaPredicted RBP12.7□□□□□ -0.38
SMAD1-204ENST00000503324 SULT1A2P50226 295 aa12.7□□□□□ -0.38
SMAD1-204ENST00000503324 EMP1P54849 157 aa12.7□□□□□ -0.38
SMAD1-204ENST00000503324 PMS2P11Q13670 270 aa12.7□□□□□ -0.38
SMAD1-204ENST00000503324 LENEPQ9Y5L5 61 aa12.7□□□□□ -0.38
SMAD1-204ENST00000503324 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 CXorf65A6NEN9 183 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 GPX1P07203 203 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 RNASE4P34096 147 aaKnown RBP12.69□□□□□ -0.38
SMAD1-204ENST00000503324 RAB5CP51148 216 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 PLECQ15149 4684 aaKnown RBP12.69□□□□□ -0.38
SMAD1-204ENST00000503324 Q6ZQT7 251 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 TVP23CQ96ET8 276 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 DKK2Q9UBU2 259 aa12.69□□□□□ -0.38
SMAD1-204ENST00000503324 KMT2CQ8NEZ4 4911 aaKnown RBP12.69□□□□□ -0.38
SMAD1-204ENST00000503324 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
SMAD1-204ENST00000503324 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
SMAD1-204ENST00000503324 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
SMAD1-204ENST00000503324 NIPSNAP3BQ9BS92 247 aa12.68□□□□□ -0.38
SMAD1-204ENST00000503324 ATG101Q9BSB4 218 aa12.68□□□□□ -0.38
SMAD1-204ENST00000503324 NKX6-2Q9C056 277 aaPredicted RBP12.68□□□□□ -0.38
SMAD1-204ENST00000503324 A0A1B0GV50 99 aa12.67□□□□□ -0.38
SMAD1-204ENST00000503324 HTN1P15515 57 aa12.67□□□□□ -0.38
SMAD1-204ENST00000503324 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
SMAD1-204ENST00000503324 CCDC28AQ8IWP9 274 aa12.67□□□□□ -0.38
SMAD1-204ENST00000503324 CYB561D1Q8N8Q1 229 aa12.67□□□□□ -0.38
SMAD1-204ENST00000503324 PHLDA1Q8WV24 401 aaPredicted RBP12.67□□□□□ -0.38
SMAD1-204ENST00000503324 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms