RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 STOML3Q8TAV4 291 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 TNFSF18Q9UNG2 199 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 NACAE9PAV3 2078 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 UBE2L5PA0A1B0GUS4 154 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 LYRM9A8MSI8 78 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 PVALBP20472 110 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-204ENST00000503215 TAS2R60P59551 318 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 Q6ZR54 194 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 SLC50A1Q9BRV3 221 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 SEC11CQ9BY50 192 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 LYRM2Q9NU23 88 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-204ENST00000503215 ZNF586Q9NXT0 402 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 KIAA1109Q2LD37 5005 aa11.43□□□□□ -0.58
SCLT1-204ENST00000503215 SIX6O95475 246 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 RLN2P04090 185 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 CDKN1BP46527 198 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 SULT1A1P50225 295 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 RAB31Q13636 194 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 LGALS9BQ3B8N2 356 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 LINC00469Q8N7U9 141 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
SCLT1-204ENST00000503215 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 PCP4L1A6NKN8 68 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 FAM74A7A6NL05 159 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 F5H768 121 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 J3KRW8 73 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 BAXQ07812 192 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 FAM74A3Q4VXF1 159 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 GCSAMLQ5JQS6 135 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 GFI1BQ5VTD9 330 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 Q6ZRG5 221 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 TMEM256Q8N2U0 113 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 RNF24Q9Y225 148 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 FGF7P21781 194 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 RPL29P47914 159 aaKnown RBP11.41□□□□□ -0.58
SCLT1-204ENST00000503215 EIF5AP63241 154 aaKnown RBP11.41□□□□□ -0.58
SCLT1-204ENST00000503215 CYCSP99999 105 aaKnown RBP11.41□□□□□ -0.58
SCLT1-204ENST00000503215 RNF212Q495C1 297 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
SCLT1-204ENST00000503215 NOP10Q9NPE3 64 aaKnown RBP11.41□□□□□ -0.58
SCLT1-204ENST00000503215 PXMP4Q9Y6I8 212 aa11.41□□□□□ -0.58
SCLT1-204ENST00000503215 PKHD1P08F94 4074 aa11.4□□□□□ -0.58
SCLT1-204ENST00000503215 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.59
SCLT1-204ENST00000503215 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.59
SCLT1-204ENST00000503215 NHLH2Q02577 135 aa11.4□□□□□ -0.59
SCLT1-204ENST00000503215 OR1L4Q8NGR5 311 aa11.4□□□□□ -0.59
SCLT1-204ENST00000503215 RNF141Q8WVD5 230 aa11.4□□□□□ -0.59
SCLT1-204ENST00000503215 CBY3A6NI87 242 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 M0R3E3 92 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 NDUFB4O95168 129 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 PYYP10082 97 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 RAB5BP61020 215 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 ERCC8Q13216 396 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 STX12Q86Y82 276 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 INO80EQ8NBZ0 244 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-204ENST00000503215 C16orf74Q96GX8 76 aa11.39□□□□□ -0.59
SCLT1-204ENST00000503215 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-204ENST00000503215 H0YIZ8 118 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 H7BYZ3 331 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 NUDT3O95989 172 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 ATP5G1P05496 136 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 S100A6P06703 90 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 TPT1P13693 172 aaKnown RBP11.38□□□□□ -0.59
SCLT1-204ENST00000503215 ATP5G3P48201 142 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 AKR1D1P51857 326 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 EIF5AL1Q6IS14 154 aaKnown RBP11.38□□□□□ -0.59
SCLT1-204ENST00000503215 THAP6Q8TBB0 222 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 SFT2D1Q8WV19 159 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 PFDN5Q99471 154 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 OR5AC2Q9NZP5 309 aa11.38□□□□□ -0.59
SCLT1-204ENST00000503215 TRBV19A0A075B6N1 114 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 TRAV12-3A0A0B4J271 114 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 S100PP25815 95 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 HBG1P69891 147 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 HBG2P69892 147 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 GUK1Q16774 197 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 ZNF493Q6ZR52 646 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 C15orf54Q8N8G6 183 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
SCLT1-204ENST00000503215 NPCDR1Q9BY65 106 aa11.37□□□□□ -0.59
SCLT1-204ENST00000503215 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
SCLT1-204ENST00000503215 ATP6V1FQ16864 119 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 LRRC37A5PQ49AS3 106 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 EXOC3-AS1Q8N2X6 119 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 ZNF471Q9BX82 626 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-204ENST00000503215 SLC25A2Q9BXI2 301 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 PKD1P98161 4303 aa11.36□□□□□ -0.59
SCLT1-204ENST00000503215 HIST1H1EP10412 219 aaKnown RBP11.35□□□□□ -0.59
SCLT1-204ENST00000503215 BLOC1S1P78537 153 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 CLINT1Q14677 625 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 MIR17HGQ75NE6 70 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms